Pairwise Alignments

Query, 310 a.a., Inner membrane protein YfdC from Escherichia coli ECOR27

Subject, 295 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  290 bits (743), Expect = 2e-83
 Identities = 148/269 (55%), Positives = 199/269 (73%), Gaps = 3/269 (1%)

Query: 27  EIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEG 86
           ++D+++ P RA  +HE IR  G++ELER   AL WSA+AAGL+MG SL+A G+ +  L  
Sbjct: 19  DVDKNQ-PPRAAVLHEIIRTQGDQELERSVAALWWSALAAGLTMGLSLMAMGLLNSRLPE 77

Query: 87  VPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLG 146
                ++ + GY  GF+ VI+ARQQLFTENT+TAVLPVM KPT+ N G L+RLW VVL+G
Sbjct: 78  GEAFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMSKPTLGNAGRLLRLWTVVLVG 137

Query: 147 NILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFP 206
           N+ GT + A+   ++PIF+ +T  AF++IG  +M+N   +MFA  IISGW+IATMVWM P
Sbjct: 138 NLCGTLLVAYVMLHLPIFDTKTDLAFLEIGRKIMENDAGQMFAKGIISGWMIATMVWMIP 197

Query: 207 AAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNIC 266
           +  +AK+ +IIL+T+L+ALGD THIVVGS E+ YLVF G L W DF   FA PTLAGNI 
Sbjct: 198 SMESAKMFIIILITYLMALGDFTHIVVGSAEVSYLVFAGELAWKDFWLVFAGPTLAGNII 257

Query: 267 GGTFIFALMSHAQIRND--MSNKRKAEAR 293
           GG+FIFAL+SHAQIR++  + +K+ A+ R
Sbjct: 258 GGSFIFALISHAQIRSEGSLPDKKAADPR 286