Pairwise Alignments

Query, 310 a.a., Inner membrane protein YfdC from Escherichia coli ECOR27

Subject, 313 a.a., putative transport from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  547 bits (1410), Expect = e-160
 Identities = 267/304 (87%), Positives = 291/304 (95%)

Query: 1   MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALL 60
           +++DKI++HS ++EVESEEK+ GK+IE+DEDRLPSRAMAIHEHIRQDGEKE+ERDAMALL
Sbjct: 4   LNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALL 63

Query: 61  WSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTA 120
           WSAIAAGLSMGASLLAKGIFHV+LE VPG FLLENLGYTFGFIIVIMARQQLFTENTVTA
Sbjct: 64  WSAIAAGLSMGASLLAKGIFHVQLESVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTA 123

Query: 121 VLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVM 180
           VLPVMQ PT+SNVGLLMRLWGVVLLGN++GTG+AAWAFEYMPIF+EETRDAFVKIGM+VM
Sbjct: 124 VLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGMEVM 183

Query: 181 KNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILY 240
           KN+P+EMFANAIISGW+IATMVWMFPAAG AKIVVIILMTWLIALGDTTHIVVGSVEILY
Sbjct: 184 KNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVEILY 243

Query: 241 LVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAE 300
           LVFNGTL WSDF+WPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRK EAR + ER E
Sbjct: 244 LVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLE 303

Query: 301 NIKK 304
             +K
Sbjct: 304 RERK 307