Pairwise Alignments

Query, 565 a.a., two-component system sensor histidine kinase YpdA from Escherichia coli ECOR27

Subject, 561 a.a., predicted sensory kinase in two-component system with YehT (NCBI) from Escherichia coli BW25113

 Score =  229 bits (585), Expect = 2e-64
 Identities = 151/509 (29%), Positives = 273/509 (53%), Gaps = 24/509 (4%)

Query: 5   FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64
           FN++L +  +  + L+  + + +  LF  L+  +   P + L    +FS+F +  TW G+
Sbjct: 4   FNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYI-VFSIFCIMGTWFGL 62

Query: 65  PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124
            ++ S+ N R I  + GG+L GP VG + G+  G+HRY   +GG+TA+ C I++I+ G +
Sbjct: 63  HIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY--SMGGMTALSCMISTIVEGLL 120

Query: 125 SGWIN-LKIPKAQRWRV--GILGG---MLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178
            G ++ + I + +  +V   I  G    + E + M++++  A      + +VS I  PM+
Sbjct: 121 GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM 180

Query: 179 LGSV---CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEI 234
           + +     +   +LL +    EK  SA   +  AL +A  T  + R   N  +  KV ++
Sbjct: 181 VTNTVGAALFMRILLDKRAMFEKYTSAF--SATALKVAASTEGILRQGFNEVNSMKVAQV 238

Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--- 291
           +  ++   AVAIT+ + +LA+ G+G+ ++  G    S  T +A+  G+++  + +E    
Sbjct: 239 LYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYR 298

Query: 292 ---HRTPEIHSMLVIPL-WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347
              H   ++ S LVIPL  E   V GT+K+Y       +S  + +  G++Q++S Q+   
Sbjct: 299 CSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAG 358

Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407
           + E+ + M  ++E++ L +++NPHFLFNALN I + IR + + A QL+  LS + R N++
Sbjct: 359 QYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK 418

Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIV 466
            +  E + +  E+  +  Y+ IE+ARF  +L V   I +E++   +P+  +QP+VENAI 
Sbjct: 419 -RPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIK 477

Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRD 495
           HG       G V IS    G  + + + D
Sbjct: 478 HGTSQLLDTGRVAISARREGQHLMLEIED 506