Pairwise Alignments

Query, 330 a.a., RNA polymerase sigma factor RpoS from Escherichia coli ECOR27

Subject, 330 a.a., RNA polymerase sigma factor (NCBI) from Escherichia coli BW25113

 Score =  640 bits (1651), Expect = 0.0
 Identities = 329/330 (99%), Positives = 330/330 (100%)

Query: 1   MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL 60
           MSQNTLKVHDLNEDAEFDENGVEVFDEKALVE+EPSDNDLAEEELLSQGATQRVLDATQL
Sbjct: 1   MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQL 60

Query: 61  YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI 120
           YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI
Sbjct: 61  YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI 120

Query: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180
           EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
Sbjct: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180

Query: 181 TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD 240
           TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
Sbjct: 181 TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD 240

Query: 241 EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300
           EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
Sbjct: 241 EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300

Query: 301 RVRQIQVEGLRRLREILQTQGLNIEALFRE 330
           RVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 301 RVRQIQVEGLRRLREILQTQGLNIEALFRE 330