Pairwise Alignments

Query, 259 a.a., PTS N-acetylgalactosamine transporter subunit IIC from Escherichia coli ECOR27

Subject, 267 a.a., N-acetylgalactosamine-specific enzyme IIC component of PTS from Escherichia coli BL21

 Score =  186 bits (472), Expect = 4e-52
 Identities = 94/260 (36%), Positives = 146/260 (56%), Gaps = 4/260 (1%)

Query: 2   EISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVWM 61
           EI+LLQ  +L  + F+ G+D +     + RP+++  L G +LGD+ TG++TGG  EL + 
Sbjct: 3   EITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELAFA 62

Query: 62  GLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGVM 121
           GL P  G QPPN I+  ++ T  A +TGV    A+G+ +PF++ +Q  I F +S  S  M
Sbjct: 63  GLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSLFM 122

Query: 122 SRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRLIDGL 181
           ++ D+ A+ ADT    R+N+  +L + + Y + AFL  Y      + ++  +P  L  G 
Sbjct: 123 TKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTHGF 182

Query: 182 GVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLK----LPVLAIAAAALAMALID 237
            VAGGI+PA+GF +LL++M K  YIPY I GF+   +++    LPV  + A        +
Sbjct: 183 EVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEFFN 242

Query: 238 LLRKSPEPTQPAAQKEEFED 257
              +     QP A K E ED
Sbjct: 243 AKSRQQAQPQPVASKNEEED 262