Pairwise Alignments

Query, 367 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECOR27

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  430 bits (1105), Expect = e-125
 Identities = 206/360 (57%), Positives = 273/360 (75%), Gaps = 6/360 (1%)

Query: 8   LLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKL 67
           +LAG    +F+    A+ IK+ + G  +GPV QYGD +F GA+QA+ADINAKGG+ G  L
Sbjct: 16  VLAGVAGHSFA----ADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDGKML 71

Query: 68  QIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAP 127
           +  +YDDACDPKQAVAVANKVVNDG+K+V+GHLCSSSTQPASDIYEDEG++MITPAAT+P
Sbjct: 72  EAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSP 131

Query: 128 ELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKK 187
           E+TARGY+LI RT GLDS QGP A  YI + VKP+ +A++HDKQQYGEG+A AV+  L+K
Sbjct: 132 EITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQTLEK 191

Query: 188 GNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMG 247
               V  F+G+ AG+KDFS+++ +LK+ N+DFVYYGGYHPE+G ILRQA+  GL  +FMG
Sbjct: 192 KGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLNAKFMG 251

Query: 248 PEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAAL 307
           PEGV N S+S IA  ++EGLLVT PK++D  PANK IV+     KQDP+G FV+  Y+A+
Sbjct: 252 PEGVGNDSISQIAQGASEGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFVFPAYSAI 311

Query: 308 QSLQAGLN--QSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTATD 365
           + +  G+   +S+D A++A+ + A +  T  G L++D KGDLK F+F V++WH     T+
Sbjct: 312 EVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEWHFGKPKTE 371