Pairwise Alignments

Query, 367 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECOR27

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 2e-80
 Identities = 151/364 (41%), Positives = 224/364 (61%), Gaps = 8/364 (2%)

Query: 4   KGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIK 63
           KG   LA   AL  S+   A D+K+ V G M+G  A +G+Q   GA+ A   INA GG+ 
Sbjct: 8   KGFLALAVATALGVSSYVQA-DVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVN 66

Query: 64  GNKLQIVKYDDACDPKQAVAVANKVVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMITP 122
           G K+ +VK DDAC+PKQAVAVAN++V+ D +  V+GH CSS+T PAS++Y++ G++ ITP
Sbjct: 67  GEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITP 126

Query: 123 AATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQ 182
            +T P++T RG   + R  G D  QG  A  YI++ +K +++A++HDK  YG+GLA A +
Sbjct: 127 GSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATK 186

Query: 183 DGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLK 242
             L+K     V ++G+T GEKDFS +V +++    D VY+GG HPE G ++RQ R  GLK
Sbjct: 187 AQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLK 246

Query: 243 -TQFMGPEGVANVSLSNIAG--ESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAF 299
             +FM  +G+    L + AG  +  +G+ +T   +   +P +K +V+  +    +P G +
Sbjct: 247 DVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTEPEG-Y 305

Query: 300 VWTTYAALQSLQAGLN--QSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDW 357
               YA+LQ+L A  N  +S+   + AK+LKAN V TVMG   WD KGDL   ++ V+ W
Sbjct: 306 TLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKGDLTVSDYVVYQW 365

Query: 358 HANG 361
              G
Sbjct: 366 DKTG 369