Pairwise Alignments

Query, 553 a.a., putative transporter from Escherichia coli ECOR27

Subject, 561 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  164 bits (414), Expect = 1e-44
 Identities = 136/565 (24%), Positives = 262/565 (46%), Gaps = 36/565 (6%)

Query: 8   VSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLHVIQEFGL 67
           + +L +V  +GL +G ++   I LG      G ++V   + Q   ++++D L++    G 
Sbjct: 14  ILLLFVVLALGLCLGKLRLGSIQLGNS---IGVLVVSLLLGQQHFSINTDALNL----GF 66

Query: 68  ILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLPVVLGIFS 127
           +LF++ +G++ GP FF+     G    + A+++V    ++   L KLF   + +  G+ +
Sbjct: 67  MLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGLTAGMLA 126

Query: 128 GAVTNTPALGAGQQILRDLGTPMEM----VDQMGMSYAMAYPFGICGILFTMWMLRVIFR 183
           G++T+TP L      LR  G         +D + + YA+ Y  G+  ++     L  +  
Sbjct: 127 GSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLSLGYALTYLIGLVSLIVGARYLPKLQH 186

Query: 184 VNVETEAQQHESSR-----TNGGALIKTINIRVENPNL----HDLAIKDVPILNGDKIIC 234
            +++T AQQ    R      N    +  I      P L        ++++ I        
Sbjct: 187 QDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYI 246

Query: 235 SRLKREETLKVPSPDTIIQLGDLLHLVGQPADLH---NAQLVIGQEV-DTSLSTKGTDLR 290
            R++R   L  P  D ++Q+GD + LVG P D H   +     G+EV D  L     D+R
Sbjct: 247 ERIRRNGILANPDGDAVLQMGDEIALVGYP-DAHARLDPSFRNGKEVFDRDL----LDMR 301

Query: 291 V--ERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLVGR 348
           +  E VVV N N +GKR+  L   + +   ++R+ R+ +E+    ++ L  GD+L + G 
Sbjct: 302 IVTEEVVVKNHNAVGKRLAQLKLTD-HGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD 360

Query: 349 PSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLI 408
              +  +A+ +G      Q   +L       +G+++G I      F  +  +G A G L 
Sbjct: 361 ARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTF--SFGMGNAAGLLF 418

Query: 409 MALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSWIG 468
             ++LG + +    + ++P  A   ++E G+++F++ VGL S G  +N  +   G   + 
Sbjct: 419 AGIMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGL-SAGSGINNGLGAIGGQMLI 477

Query: 469 YGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYA 528
            G +++ VP++   +    + +MN   + G + G+ T  PA+   ++    S   AL YA
Sbjct: 478 AGLIVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDT-ARSNIPALGYA 536

Query: 529 TVYPLVMFLRIITPQLLAVLFWSIG 553
             Y +   L  +   ++ +++  +G
Sbjct: 537 GTYAIANVLLTLAGTIIVMVWPGLG 561