Pairwise Alignments

Query, 553 a.a., putative transporter from Escherichia coli ECOR27

Subject, 554 a.a., TrkA C-terminal domain protein from Bacteroides ovatus ATCC 8483

 Score =  370 bits (949), Expect = e-106
 Identities = 205/545 (37%), Positives = 327/545 (60%), Gaps = 20/545 (3%)

Query: 8   VSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLHVIQEFGL 67
           V +L+L++ +GL +G V F G+ LG+  V F GI+ GH     G+++   ML+  + FGL
Sbjct: 17  VVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGHL----GLSVDPQMLNYAESFGL 72

Query: 68  ILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLPVVLGIFS 127
           ++FVY++G+QVGPGFF+S R  G+ LN+ A+ +V++G L+T +      + LP ++GI  
Sbjct: 73  VIFVYSLGLQVGPGFFSSFRKGGVTLNMLALGVVLLGTLLTVVASYATGVSLPDMVGILC 132

Query: 128 GAVTNTPALGAGQQILRDLGTPMEMVDQMGMSYAMAYPFGICGILFTMWMLRVIFRVNVE 187
           GA TNTPALGA QQ L+ +G          +  A+AYP G+ G++  + ++R +     +
Sbjct: 133 GATTNTPALGAAQQTLKQMGMDSSTP---ALGCAVAYPMGVVGVILAVLLIRKVLVRKED 189

Query: 188 TEAQQHESSRTNGGALIKTINIRVENPNLHDLAIKDVPILNGDKIICSRLKREETLKVPS 247
            E ++ + +     A  +     V NP + + +IKD+  ++  K + SRL R+  + +P+
Sbjct: 190 LEIKEKDDANKTYIAAFQ-----VHNPAIFNKSIKDIARMSYPKFVISRLWRDGHVSIPT 244

Query: 248 PDTIIQLGDLLHLVGQPADLHNAQLVIGQEVDTSLSTKGTD-------LRVERVVVTNEN 300
            D I++ GD L +V    D     ++ G++ +T  + +  D       L  +R+VVT   
Sbjct: 245 SDKILKEGDRLLVVTAEKDALALTVLFGEQENTDWNKEDIDWNAIDSELISQRIVVTRPE 304

Query: 301 VLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLVGRPSAIDAVANVLG 360
           + GK++  L  +  Y + ISR+ R+GV+L+A+  + LQ GD L +VG  +AI  V  VLG
Sbjct: 305 LNGKKLGSLRLRNHYGINISRVYRSGVQLLATPGLVLQLGDRLTVVGEAAAIQNVEKVLG 364

Query: 361 NAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLIMALILGRIGSIG 420
           NA + L++  ++ VFIGI LG+ LG+IP   PG    +KLGLAGGP+I+ ++LG  G   
Sbjct: 365 NAVKSLKEPNLVVVFIGIVLGLALGAIPFSFPGVSTPVKLGLAGGPIIVGILLGTFGPRI 424

Query: 421 KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSWIGYGALITAVPLIT 480
            +  +   SANL LR LG+ ++L+ +GL +G  F +T+   EGL WI  GA +T VP + 
Sbjct: 425 HMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTIVPTVL 484

Query: 481 VGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRII 540
           VG +A  + K+++ T+ GML GSM +P AL + N+  P     +++YATVYPL MFLR+I
Sbjct: 485 VGFVAFKMMKIDFGTVSGMLCGSMANPMALNYVNDTIPGDN-PSVAYATVYPLCMFLRVI 543

Query: 541 TPQLL 545
             Q+L
Sbjct: 544 IAQVL 548