Pairwise Alignments

Query, 284 a.a., DNA-binding transcriptional regulator RclR from Escherichia coli ECOR27

Subject, 273 a.a., transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 4/245 (1%)

Query: 34  GELSVIRWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLR 93
           G+ SV   H L  G    +   G+   L    ++L  +   H L   D +   +VC TL+
Sbjct: 30  GQHSVGHAHLLRSGRLAFKDKRGQRIELTEPTLILAVRPQEHHLLATDADEAELVCATLQ 89

Query: 94  LQHSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFF 153
               A   LT       + P+    E   L   + +L +E+     G D + +++     
Sbjct: 90  FDGGANNPLTLALPDFIIKPLG---ELQGLDGTLDWLFEEAFGDECGRDVILNRLFELMI 146

Query: 154 TLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQL 213
              +R  IA  +    +++ L + +L   +  + + P   W+V  LA+++ MSRASFA  
Sbjct: 147 IQLLRHLIASRSIASGMMAGLANAQLSRALVGIHDEPQRNWSVAELANLSGMSRASFASH 206

Query: 214 FRDVSGTTPLAVLTKLRLQIAAQMFSREMLPVVVIAESVGYASESSFHKAFVREFGCTPG 273
           FR++ G TP   L   R+ +  Q   RE  P+ +IA+ VGY S S+  + F R+ G +P 
Sbjct: 207 FREIVGITPADYLANWRISL-TQKRLREGRPIALIADEVGYESPSALARTFRRKVGASPK 265

Query: 274 EYRER 278
           ++ ++
Sbjct: 266 QWLQQ 270