Pairwise Alignments

Query, 547 a.a., Flagellar hook-associated protein 1 from Escherichia fergusonii Becca

Subject, 680 a.a., Flagellar hook-associated protein 1 from Alteromonas macleodii MIT1002

 Score =  187 bits (476), Expect = 9e-52
 Identities = 142/493 (28%), Positives = 235/493 (47%), Gaps = 45/493 (9%)

Query: 4   LINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGV 63
           L + A SG+NA+   L T SNNI++ N  GY R+ T +  +            GV +   
Sbjct: 6   LFSLATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQNSQVF---------GVEIGNT 56

Query: 64  QREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSN 123
           +R  + F  NQLR   T    L A   + + IDN+L++  +S++  + ++F +LQT   +
Sbjct: 57  ERIINVFAQNQLRRDITSVGELEAFSSKTAAIDNLLASEANSISQGLSEYFAALQTAADD 116

Query: 124 AEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQI 183
             + A+R  ++GKSE L  + KT   Y+ ++++++N+   + V++ N     I  LN  I
Sbjct: 117 PTNLASRDQVLGKSESLYQRMKTLSDYMLEKEEELNLEFTSMVNRANTLIGNIGDLNRNI 176

Query: 184 SRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEV--SVQDGGTYNITMANGYSLVQGSTA 241
               G      P+ LL++RDQ + EL  I+G+ V  S    G   I + +G SLV  + A
Sbjct: 177 VIANGNNTSDQPSALLNERDQAIDELASIMGITVKESTTQNGAVTINLTSGESLVLENGA 236

Query: 242 RQLAAVPSSADPS------RTTVAYVDRTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTR 295
             L  + S+AD +       T      +   +I + E+ L  G+LGG+  +R++ L  T 
Sbjct: 237 FNLFELSSNADLTTKEIKLETNFGSQTKNDASIRVVEEDLG-GALGGLFRYRNEVLGPTM 295

Query: 296 NTLGQLALAFAEAFNTQHKAGFDANGDAGKDFFAIGKPAVLQNTKNNGDVAIGATVTDAS 355
             +GQL++AFA+A NTQ+K G D +G  G + F I     L     +GD  +   +T+  
Sbjct: 296 RDVGQLSVAFADAMNTQNKLGMDLDGQIGGNIFDIPFFRGLAYEDTSGDYIVTGQLTEGK 355

Query: 356 AVLAT--DYKISF------DNNQWQVTRLASNTTFTVTPDANGKVAFD------------ 395
               T  DY+I           Q +VT L  N   T   D  G+   D            
Sbjct: 356 GAELTDADYRIEVMAVSAGVPTQIKVTLL--NPDGTPKKDGMGQDIVDPSVAVTAGFAEL 413

Query: 396 --GLELTFTGTPA--VNDSFTLKPVSDAIVNMDVLITDEAKIAMASAEDAG-DSDNRNGQ 450
             G+E+ F+G+ A  V + F ++P  +   N+++       +A A+   AG DS N    
Sbjct: 414 AGGIEVNFSGSDAYTVGNEFLIQPAKNVASNIEMATNRPEDLAFANPVRAGADSTNLGSA 473

Query: 451 ALLDLQSNSKTVG 463
            ++D+  ++  VG
Sbjct: 474 NVIDVTVSNTEVG 486



 Score = 78.6 bits (192), Expect = 7e-19
 Identities = 77/308 (25%), Positives = 120/308 (38%), Gaps = 47/308 (15%)

Query: 252 DPSRTTVAYVDRTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNT 311
           DPS    A     AG IE+     +  ++G         +   +N    + +A     N 
Sbjct: 401 DPSVAVTAGFAELAGGIEVNFSGSDAYTVGNEFL-----IQPAKNVASNIEMAT----NR 451

Query: 312 QHKAGFDANGDAGKDFFAIGKPAVLQNTKNNGDVAIGATVTDASAVLATDYKISF----- 366
                F     AG D   +G   V+  T +N +V   A       + +   +ISF     
Sbjct: 452 PEDLAFANPVRAGADSTNLGSANVIDVTVSNTEVGTSAFDGAGGLLNSAPAQISFTAADT 511

Query: 367 ----DNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAIVN 422
               D +   +  +   T  T      G     G +L+  G P   DSF++   +D    
Sbjct: 512 YEVLDGSGTVLATVMGTTDLTNLISQAGISPDPGFDLSLDGVPKAGDSFSISYNTD---- 567

Query: 423 MDVLITDEAKIAMASAEDAGDSDNRNGQALLDLQSNSKT------VGGAKSFNDAYASLV 476
                              G +DN N   L  LQ+ +K           ++F DAYAS+V
Sbjct: 568 -------------------GFNDNSNALNLAALQNENKVQVSSEATNTPRTFQDAYASMV 608

Query: 477 SDIGNKTATLKTSSATQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTA 536
             IG   +    S A+   +  Q  N  +S+SGV+LDEE  NL ++QQ Y A A++L TA
Sbjct: 609 GRIGEDASMASVSLASAEAMKVQSQNWFESVSGVSLDEEAANLIKYQQSYAAAARILSTA 668

Query: 537 NAIFDALI 544
             +F+ ++
Sbjct: 669 QELFNTIL 676