Pairwise Alignments

Query, 429 a.a., Ribosomal RNA small subunit methyltransferase B from Escherichia fergusonii Becca

Subject, 429 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Escherichia coli ECRC99

 Score =  857 bits (2213), Expect = 0.0
 Identities = 417/429 (97%), Positives = 425/429 (99%)

Query: 1   MKKQRNLRSMAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQSDW 60
           MKKQRNLRSMAAQA+EQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQ DW
Sbjct: 1   MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60

Query: 61  LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLING 120
           LINK MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGA+AIKRPQLKGLING
Sbjct: 61  LINKSMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120

Query: 121 VLRQFQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNR 180
           VLRQFQRQQ+ELLAEFN SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLR+NR
Sbjct: 121 VLRQFQRQQEELLAEFNTSDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180

Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMT 240
           THHSRD+WLALLDEAGMKGFPHADYPDAV+LETPAPVHALPGFE+GWVTVQDASAQGCMT
Sbjct: 181 THHSRDTWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240

Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVK 300
           WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV+AVDIDEQRLSRVYDNLKRLGMKATVK
Sbjct: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300

Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360
           QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI
Sbjct: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360

Query: 361 WSHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420
           W HLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG
Sbjct: 361 WPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420

Query: 421 FFYAKLIKK 429
           FFYAKLIKK
Sbjct: 421 FFYAKLIKK 429