Pairwise Alignments

Query, 312 a.a., substrate-binding domain-containing protein from Dickeya dianthicola ME23

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  429 bits (1102), Expect = e-125
 Identities = 217/329 (65%), Positives = 257/329 (78%), Gaps = 24/329 (7%)

Query: 4   MKDVARLAGVSTSTVSHVINNNRYVSDAIRYRVMKAVEQLNYAPSALARSLKINQTRTIG 63
           MKDVARLAGVSTSTVSHVIN +R+VS+ I  +V  A++ LNYAPSALARSLK+NQTRTIG
Sbjct: 1   MKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 64  MLLTASSNPFYAEVVRGVERCCYERGYSLILCNTEGDHHRLSRSLETLLQKRVDGLLLMC 123
           ML+TAS+NPFY+E+VRGVER C+ERGYSL+LCNTEGD  R++R+LETL+QKRVDGLLL+C
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 124 TESHMPSPDIIRRYPSIPVVMMDWAPF--EGSSDVIKDNSLQGGEMATHHLIS------- 174
           TE+H PS +I+ RYPSIP VMMDW+PF  EG SD+I+DNSL GG++AT +LI        
Sbjct: 121 TETHQPSREIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDKGFTRIA 180

Query: 175 ---------------QGYRKAMHQAGLSILPGYEVIGDFEFETGFRAMQQLLALPERPDA 219
                          +GYR AM +AGL+I  GYE+ GDFEF  GF AMQ LLA  +RP A
Sbjct: 181 CITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQA 240

Query: 220 VFTSNDAMAVGVYRALYEAGLSIPDDMAVVGYDDIELARYLSPPLTTIHQPKDELGELAI 279
           VFT NDAMAVG Y+ALY+AGL IP DM V+GYDDIELARY++PPLTTIHQPKDELGELAI
Sbjct: 241 VFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDELGELAI 300

Query: 280 DTLFHRLEHPDAEHNVLVLTPELIIRDSV 308
           D L HR+  P  +   L LTP L +R SV
Sbjct: 301 DVLIHRMAQPALQQQRLQLTPVLTVRGSV 329