Pairwise Alignments

Query, 944 a.a., DNA polymerase I from Dickeya dianthicola ME23

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 559/941 (59%), Positives = 684/941 (72%), Gaps = 34/941 (3%)

Query: 8   PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLQQYHPSHVAVVFDAKGK 67
           PL+LVDGSSYLYRA+HA PPLT S G PTGA+ GVLNML+SL +QY  S  AVVFDAKG 
Sbjct: 5   PLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFDAKGG 64

Query: 68  TFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGTLAQQAER 127
           TFRD +F  YK++RP MPDDLR QIEPLH  VKA+G PLL V GVEADDVIGTLA+ +  
Sbjct: 65  TFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLARSSAA 124

Query: 128 AGKPVLISTGDKDMAQLVTPNITLINTMNNTILGPDEVCAKYGIPPSLIIDFLALMGDSS 187
            G+PV+ISTGDKDMAQLV  +ITL+NTM  ++L    V  K+G+ P  IIDFLALMGD  
Sbjct: 125 LGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALMGDKV 184

Query: 188 DNIPGVPGVGEKTAQALLAGLGG-LDALYADLDKIAGLTFRGAKTMAAKLEQNKEVAYLS 246
           DNIPGVPGVGEKTA  LL G+GG L  LYA+LDK+  L  RGAKT+ AKLE++++ A+LS
Sbjct: 185 DNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDAAFLS 244

Query: 247 YQLATIKTDVELELGCEQLTVNEPDAVELRELFTRYEFKRWLADVEAGQWLQGGKKNPPA 306
           Y+LATIK DV L++  E L   EPD   L  L+T  EFK W+A+++      G    P  
Sbjct: 245 YELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDVAPAV 304

Query: 307 TPFVKATAGGEPKEAASVLSQDGYVTILDEKVLLDWLERIKTAALFSFDTETDGLDTLTA 366
            P VK  A               Y TILD+     WLE+++ A LF+FDTET GLD   A
Sbjct: 305 EPAVKVEAK--------------YETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQA 350

Query: 367 NLVGVSLAIKPGEAAYLPLGHITSRVYSSNIYSSTVSPATRMSTQLGSDRVLALLKPLLE 426
            LVG+S A++P EAAY+PL H                       QL  + VL  LKPLLE
Sbjct: 351 QLVGLSFAVEPHEAAYVPLAHDYEGA----------------PVQLDREAVLLALKPLLE 394

Query: 427 DEGIRKIGQNLKFDKGVMARCG--IDLRGIAFDTMLESYVLDSVAGRHDMDSLSERYLQH 484
           D    K+GQN K+D  ++A     I++RG+A+DTMLESYVL+S A RHDMDSL+++YL H
Sbjct: 395 DPAKAKVGQNAKYDINILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDH 454

Query: 485 KTITFEEIAGKGKKQLTFDRIPLAQASVYAAEDADVTLRLHETLWAKLEPQQELRKVFQN 544
            TI FE+IAGKG KQLTF++I L +A  YAAEDAD+TLRLH  L A+L     ++ V  +
Sbjct: 455 TTIAFEDIAGKGAKQLTFNQINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMD 514

Query: 545 IDMPLVPVLSRIERTGVLINTAILAEHSRELTQRLAELEVQAHELAGEAFNLSSPKQLGA 604
           I+MPLVPVL+RIER G L++  +L   S EL  ++AELE++A+ELAGE FNL SPKQLG 
Sbjct: 515 IEMPLVPVLARIERQGALVDAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGT 574

Query: 605 ILYEKLQLPVIKKTPKGAPSTNEEVLVELALD-YPLPKLILEHRGLAKLKSTYTDKLPQM 663
           ILY+KL +PV+ KT KG PST E VL ELAL  YPLP++++++R L+KLKSTYTDKLP  
Sbjct: 575 ILYDKLGMPVLSKTAKGQPSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQ 634

Query: 664 INPLTKRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRILAADYS 723
           INP T R+HTSY QAV ATGRLSSSDPNLQNIP+R  EGRRIRQAFIA  GY++LAADYS
Sbjct: 635 INPRTGRIHTSYQQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYS 694

Query: 724 QIELRIMAHLSRDAGLLRAFSHGLDIHRATAAEVFGLPLDRVTTEQRRSAKAINFGLIYG 783
           QIELRIMAHL++D GLL AF + LD+HRATAAEVFG+ L+ VTT+QRRSAKAINFGLIYG
Sbjct: 695 QIELRIMAHLAKDEGLLHAFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYG 754

Query: 784 MSAFGLSRQLAIPRNEAQKYMNLYFERYPGVQEYMERTRQQAAAQGYVSTLDGRRLYLPD 843
           MSAFGL++Q+ + R ++Q Y++ YF RYPGV  YMERTR QAA QG+V TL GRRLYLPD
Sbjct: 755 MSAFGLAKQIGVDRKQSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPD 814

Query: 844 IHSRNANSRKAAERAAINAPMQGTAADIIKKAMIAIDAWLQQEKPLVTMLMQVHDELVFE 903
           I+++N   RK AER AINAPMQGTAADIIK+AM+ +D WL +      +++QVHDELV E
Sbjct: 815 INAKNPALRKGAERTAINAPMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLE 874

Query: 904 VHHSVLDETSEKIRNLMEGCMQLDVPLQVDIGTGSNWDQAH 944
           V   ++ +  ++IR  M    QLDVPL V+ G G+NWD+AH
Sbjct: 875 VREDLVQQVKDEIRQHMSQAAQLDVPLLVEAGVGANWDEAH 915