Pairwise Alignments

Query, 285 a.a., RNA polymerase sigma factor RpoH from Dickeya dianthicola ME23

Subject, 287 a.a., RNA polymerase subunit sigma from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  104 bits (260), Expect = 2e-27
 Identities = 77/272 (28%), Positives = 146/272 (53%), Gaps = 20/272 (7%)

Query: 15  SLEGYIRAANAYPMLTAEEERALAERLHYHGDLDAAKQLILSHLRFVIHVARNYSGYGLP 74
           SL+ Y++      +LT +EE +LA+R+   GD  A ++L  ++LRFV+ VA+ Y   GL 
Sbjct: 17  SLDKYLQEIGKVDLLTPDEEVSLAQRIK-EGDQFALEKLTKANLRFVVSVAKQYQNQGLS 75

Query: 75  QADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTK--AQ 132
             DLI EGN+GL+KA +RF+   G + +S+AV WI+  I + +    RIV++   +  + 
Sbjct: 76  LGDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGSL 135

Query: 133 RKLFFNLRKTKQRLGWFNQDEVELVARELGVTSK---DVREMESRMAAQDMTFDPSPEDD 189
            K+  +  + +Q+  +  +   E +A  L +T+    D  ++  R  + D  F    E+ 
Sbjct: 136 NKISKSFSELEQK--FEREPSPEEIAEVLELTTAEVVDTLKISGRHVSVDAPFVQGEEN- 192

Query: 190 AQPGQPMAPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHIIRARW-LDD 248
                 +  +L  +D+ S    G+  D+       ++  AL  L +R   +I   + L+ 
Sbjct: 193 -----RLLDVLENEDEESPDM-GLMNDS----LRKEVQRALSTLTKREADVITLYFGLNG 242

Query: 249 DNKSTLQELADHYGVSAERIRQLEKNAMKKLR 280
           ++  TL+E+ + + ++ ER+RQ+++ A+++LR
Sbjct: 243 EHSLTLEEIGEKFNLTRERVRQIKEKAIRRLR 274