Pairwise Alignments

Query, 370 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  438 bits (1127), Expect = e-127
 Identities = 214/360 (59%), Positives = 272/360 (75%), Gaps = 2/360 (0%)

Query: 2   KLSKGNALLVGCLAAAMSHAANAADIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKG 61
           ++SK  A +V  LA    H+  A  IK+ I G  +GPV QYGDM+F GA+QAIADINAKG
Sbjct: 7   QISKLFAAMV--LAGVAGHSFAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKG 64

Query: 62  GVNGNKLVGVEYDDACDPKQAVAVANKVINEGIHYVIGHLCSSSTQPASDIYEDEGVIMI 121
           GV+G  L   EYDDACDPKQAVAVANKV+N+G+ +V+GHLCSSSTQPASDIYEDEGVIMI
Sbjct: 65  GVDGKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMI 124

Query: 122 TPAATAPDLTTRGYKLVMRTTGLDSDQGPTAAKYILEHVKPQRIAVVHDKQQYGEGLARA 181
           TPAAT+P++T RGYKL+ RT GLDS QGP A  YI +HVKP+ +AV+HDKQQYGEG+A A
Sbjct: 125 TPAATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATA 184

Query: 182 VQDSLKKAKANVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQARAAG 241
           V+ +L+K    V +FEG+ AGDKDFS+++ +LK+ NVDFVY+GGY+PE+G ILRQA+  G
Sbjct: 185 VKQTLEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKG 244

Query: 242 ITTKFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPTNQPIVDALKAKKLDSTGPFV 301
           +  KFMGPEGVGN S+S IA  ASEG+LVTLPK +D  P N+ IV+     K D TGPFV
Sbjct: 245 LNAKFMGPEGVGNDSISQIAQGASEGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFV 304

Query: 302 WTTYAALQSLTTAMQRTGSTEPAKLAADLKAKSVDTVMGPLNWDEKGDLKGFEFGVFEWH 361
           +  Y+A++ +   ++   S + AK+A  + A +  T  G L++D KGDLK F+F V+EWH
Sbjct: 305 FPAYSAIEVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEWH 364