Pairwise Alignments

Query, 370 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  159 bits (403), Expect = 9e-44
 Identities = 105/354 (29%), Positives = 182/354 (51%), Gaps = 8/354 (2%)

Query: 2   KLSKGNALLVGCLAAAMSHAANAADIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKG 61
           +L+ G A   G    A    A  A  ++     ++GP A  G+     AR A+  IN  G
Sbjct: 9   RLALGLACAAGLAGFAGGAFAQGATTRIGFQAGLTGPAAADGNAGLAAARLAVEQINGAG 68

Query: 62  GVNGNKLVGVEYDDACDPKQAVAVANKVINEGIHYVIGHLCSSSTQPASDIYEDEGVIMI 121
           GVNG KL  V YDD   P+QAV +AN+++ +G+  V+    S  ++ A+ +++   +  I
Sbjct: 69  GVNGKKLELVVYDDQGKPEQAVPIANRMVGDGVRAVVSAGFSGPSRAAAPVFQRAKIPYI 128

Query: 122 TPAATAPDLTTRGYKLVMRTTGLDSDQGPTAAKYILEHVKPQRIAVVHDKQQYGEGLARA 181
              A AP++T  G   + R T +   QG  AAK + + +  +R  ++  K  +G+ LA  
Sbjct: 129 AAIAFAPEITRTG-NYMFRVTSVGEVQGRAAAKLMGDVLHKKRAVLLTIKTDFGKTLAAG 187

Query: 182 VQDSLKKAKANVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQARAAG 241
            +++  K    ++        D+ F  L+A +K +N D +Y  G+Y   G ++ Q R+AG
Sbjct: 188 FKEAAPKFGVQLLKEYEYAPSDRQFGPLIASIKADNPDVIYATGFYFTAGPLVAQLRSAG 247

Query: 242 ITTKFMGPEGVGNSSLSNIAGAASEGMLVTLPKRY-DQVPTNQPIVDALKA--KKLDSTG 298
           +T   +G E + +    +IAG A+EG ++T    +  Q+P    I D LKA  K  +S  
Sbjct: 248 VTADVVGAESLSSQQYIDIAGQAAEGTVITNVIDWGSQLP---EIADFLKAYEKATNSKA 304

Query: 299 PFVWT-TYAALQSLTTAMQRTGSTEPAKLAADLKAKSVDTVMGPLNWDEKGDLK 351
               T T+AA+ +L  A+++  S +P K+ A L+   V T +G +++++  ++K
Sbjct: 305 EAAATSTHAAVVALAAAIRKAKSDDPDKIRAALETLDVTTAIGRISFNKLHEVK 358