Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Dickeya dianthicola ME23

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  333 bits (854), Expect = 3e-96
 Identities = 167/301 (55%), Positives = 228/301 (75%), Gaps = 1/301 (0%)

Query: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGID 67
           FLQQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y++ I +A L   G++
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 68  AGWLLIGAAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127
           +  LL+    +  +V++  YG++IER+AYKP+RNS RL  LISAIG+S+ LQNY  ++QG
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 128 SRDVALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAMLALTLFIRYSRMGRACRAC 187
           +R   +P+L+ G   +   +GF   L+  ++ I +  F+ M  LT  I+Y+++GR CRA 
Sbjct: 125 ARQQGVPTLLEGAMRVEVGSGFVQ-LTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183

Query: 188 AEDLKMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247
            +D KMAS+LGI+TDRVIS  FVIGAVMAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243

Query: 248 LGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGRPEVEK 307
           LGGIGS+PGAM+GG++LGI+E+L S  ++++YKDV SF+LL+++L+  P G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAK 303

Query: 308 V 308
           V
Sbjct: 304 V 304