Pairwise Alignments

Query, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  380 bits (976), Expect = e-110
 Identities = 207/416 (49%), Positives = 276/416 (66%), Gaps = 17/416 (4%)

Query: 5   TLVNAVVSALVLLVLATFVMGMQLSLDGTRLVVHGAENVRWMWIIAACALVFLFQLLRPV 64
           +L+  +V+ L+ L++   V+G+ L  DG       AE  R  W++    +      L   
Sbjct: 22  SLLETIVAGLLALIVFGPVVGVVL--DG---YTFNAEPRRVAWLVGGVMVGRFLLSLFLQ 76

Query: 65  LAQGAKKV-------SGPGLVLPSFDGSTPRQKLLALALIIAAVAWPFVVSRGTVDIATL 117
            A G + +       SG  +  P +     R + +  ALI+ A+ +P   ++  + +  L
Sbjct: 77  TAPGQRMLLGFDSGGSGVHVTAPDYKS---RLRYIIPALIVIAIVFPIFANKYLLTVVIL 133

Query: 118 TMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAAL 177
            +IY++LGLGLN+VVGL+GLL LGY  FYAIGAY  AL   Y GLGFW  LPLA + AAL
Sbjct: 134 GLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAAAL 193

Query: 178 SGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNGISQIPKPTFFGLEFNR 237
           +G +LGFPVLR+ GDYLAIVTLGFGEI+R++L N   FTGGPNG+   P PTFFGLEF R
Sbjct: 194 AGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPA-PSPTFFGLEFGR 252

Query: 238 APREGGWDTFHHFFGLNYDPSDRIIFLYMVALLLVLLTLFVINRLLRMPLGRAWEALRED 297
             ++GG    H FFG  Y+ S + +F+Y V  ++VL  L++ +RL RMP+GRAWEALRED
Sbjct: 253 RAKDGGVP-IHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALRED 311

Query: 298 EIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVLG 357
           EIACRS+GL+   +KL+AFT+ A+ AG AG  FA  QGFV+P SFTF ESA +LAIVVLG
Sbjct: 312 EIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLG 371

Query: 358 GMGSQFAVILAAILLVVSRELMRDLNEYSMLLLGALMVLMMIWRPQGLLPMKRTQI 413
           GMGS   V++AA +L V+ EL+R  +EY +LL G LMVLMMIWRP+GL+ + RT +
Sbjct: 372 GMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGLIRISRTGV 427