Pairwise Alignments

Query, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 1e-36
 Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 25/328 (7%)

Query: 79  LPSFDGSTPRQKLLALALIIAA-VAWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGL 137
           LP   G  P      L+L++A+ VA P ++   T  +AT  +I+ +  L  N+++G +GL
Sbjct: 7   LPVAKGRAPA----LLSLVVASLVALPLLLPSAT--LATEILIFAMAALACNLLLGYTGL 60

Query: 138 LVLGYGGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIV 197
           L  G G F+ +GAY  ALL  +   G +  L  A +  A    L+G   +R  G Y  ++
Sbjct: 61  LSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVML 120

Query: 198 TLGFGEIVRILLLNNTGFTGGPNGISQIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDP 257
           TL F ++   L    +G+TGG NG+  +P+P                +   H      DP
Sbjct: 121 TLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNI--------------EIAGHVLVDLADP 166

Query: 258 SDRIIFLYMVALLLVLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFT 317
               +F+ ++ LL+    L    R++R P G    A+RE+E    ++G      K+  F 
Sbjct: 167 RHFYVFVAVLFLLIFAAAL----RVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFM 222

Query: 318 ISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRE 377
           +S A  G AG L+A    F    +   + S  +L + ++GG GS F  +L A  +V+  +
Sbjct: 223 LSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGD 282

Query: 378 LMRDLNEYSMLLLGALMVLMMIWRPQGL 405
           ++ +L    ++LLG +++L++++   GL
Sbjct: 283 VLSELWPRWLMLLGVILILVVVFMRGGL 310