Pairwise Alignments

Query, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

Subject, 348 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  160 bits (404), Expect = 7e-44
 Identities = 101/331 (30%), Positives = 175/331 (52%), Gaps = 43/331 (12%)

Query: 92  LALALIIAAVAWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAY 151
           L +AL+ AA   P ++++  V +  L +I  +  LGLN++ G +GL+ LG+ GF A+GAY
Sbjct: 28  LLVALLAAA---PLLLAKYYVSVILLLLITAVGVLGLNLLTGTTGLISLGHSGFLAVGAY 84

Query: 152 TYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLN 211
           T  +++   G      +   G++AA++G ++G P LRL+G YLAI T+ F  I+  L+LN
Sbjct: 85  TAGIVASKLGWPMLASIFAGGVSAAIAGIIVGIPSLRLKGLYLAITTMAFAVIINHLILN 144

Query: 212 NTGFTGGPNGISQIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDPSDRIIFLYMVALLL 271
               TGG  G++ +P+P+ FG        E G+                    Y V L  
Sbjct: 145 GGDLTGGSEGLT-VPQPSLFGQALG---AERGY--------------------YYVVLCF 180

Query: 272 VLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFA 331
           V++  F+   +LR  +GRA++A+RE +IA +++G++  + KL AF +SA + G AG L A
Sbjct: 181 VVVFTFITLNILRSRIGRAFQAIREHDIAAKAMGVNLVRYKLLAFMVSAFYTGIAGGLLA 240

Query: 332 ARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELM------------ 379
               +++ +SF+ + S   L+++++GG+GS    +L    +V+  E +            
Sbjct: 241 YYTRYLNVDSFSLLISIEALSMLIVGGLGSVAGALLGTAFIVLLNESLGFVFGMIGASFG 300

Query: 380 ----RDLNEYSMLLLGALMVLMMIWRPQGLL 406
                   E   ++ G  +VL + + P GL+
Sbjct: 301 GSGSTAAYEIKGVIYGLAIVLFLRFEPDGLM 331