Pairwise Alignments

Query, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

Subject, 330 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (455), Expect = 8e-50
 Identities = 117/317 (36%), Positives = 165/317 (52%), Gaps = 25/317 (7%)

Query: 91  LLALALIIAAV-AWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIG 149
           L AL L  AA+ A P  +    + + +  +++II  +GLN+ VG +G   LG+  F+ IG
Sbjct: 6   LAALVLCAAALLAAPHFMKNYGIYLLSYWLVFIIATMGLNLTVGYAGQKSLGHAAFFGIG 65

Query: 150 AYTYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILL 209
           AYT A++    GL FW  LP A L   + G +LGFP LR++  YLA  TLGF   V +++
Sbjct: 66  AYTVAIMMKA-GLSFWLGLPTAMLICFVVGIILGFPALRVQTIYLAFATLGFNTAVWLVM 124

Query: 210 LNNTGFTGGPNGISQIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDPSDRIIFLYMVAL 269
            N    TGG  GI+ I +P  FGL       EG    +H              F+  V +
Sbjct: 125 RNEEWLTGGTFGINNIARPGLFGLSL-----EGNLAYYH--------------FVLAVTV 165

Query: 270 LLVLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTL 329
           LL  L  +    LLR P G+A+ ALR++ I   SLG+      L AF I A +AG AG L
Sbjct: 166 LLAALLWW----LLRSPWGKAFTALRDNPIRAESLGVDTRSYTLLAFAIGAVYAGVAGAL 221

Query: 330 FAARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEYSMLL 389
           FA+   F+ P  FT   S  +  +VV+GG G     +L A + V+  E +R    + + +
Sbjct: 222 FASLVQFIEPAPFTVGASIMMYLMVVVGGPGYFLGPVLGAAVGVILPEWLRFAQAWYLFV 281

Query: 390 LGALMVLMMIWRPQGLL 406
            G  +VL+MIW P GLL
Sbjct: 282 FGGAVVLLMIWLPDGLL 298