Pairwise Alignments

Query, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

Subject, 360 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  157 bits (397), Expect = 5e-43
 Identities = 119/350 (34%), Positives = 179/350 (51%), Gaps = 44/350 (12%)

Query: 60  LLRPVLAQGAKKVSGPGLVLPSFDGSTPRQKLLALALIIAAVAWPFVVSRGTVDIATLTM 119
           ++ PV A G  ++   GLVL           LLALA      A P +V+   +  AT+T+
Sbjct: 24  VIAPVAAGGLSRLERTGLVL-----------LLALAC-----ALPLLVTDYRLFQATMTL 67

Query: 120 IYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAALSG 179
           IY I+  GL ++ G SG + LG+G FYA+GAYT A+L    G+ +W  LP+AG    + G
Sbjct: 68  IYAIVLFGLTILTGYSGQISLGHGAFYALGAYTTAILIARLGVPYWATLPIAGAVCMVVG 127

Query: 180 FLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNT--GFTGGPNGISQIPKPTFFGLEFNR 237
           FL G P LRL+G YLA+ T          L + +  G+TGG  GI+         LE   
Sbjct: 128 FLFGRPALRLQGHYLALATFALAVATPQFLKHKSLQGWTGGVQGIT---------LEKPS 178

Query: 238 APREGGWDTFHHFFGLNYDPSDRIIFLYMVALLLVLLTLFVINR-LLRMPLGRAWEALRE 296
           AP           FGL   P     +LY++  L V + +FV+ R LL+  +GRA  A+R+
Sbjct: 179 AP-----------FGLPMTPD---AWLYLLT-LFVAVVMFVLGRNLLKGRIGRALLAIRD 223

Query: 297 DEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVL 356
              A  ++G++ +  K  AF++SA F G AG L A    FV+P+SF  + S   L   V+
Sbjct: 224 HPTAASAMGVNISLYKSLAFSVSALFTGVAGGLGAIVVQFVAPDSFHPLLSILFLVGAVI 283

Query: 357 GGMGSQFAVILAAILLVVSRELMRDLNEYS-MLLLGALMVLMMIWRPQGL 405
           GG+ S +  +  A+ +        DL++ +   + G LM+L +    +G+
Sbjct: 284 GGLSSWWGPLFGAMFIQFVPNFAEDLSKSAPWAIYGVLMILSVFLLKKGI 333