Pairwise Alignments

Query, 720 a.a., DNA helicase II from Dickeya dianthicola ME23

Subject, 728 a.a., DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex from Pseudomonas putida KT2440

 Score =  908 bits (2347), Expect = 0.0
 Identities = 453/725 (62%), Positives = 562/725 (77%), Gaps = 7/725 (0%)

Query: 2   DVSDLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAVT 61
           D+S LL+SLND QR AVAA     LVLAGAGSGKTRVLVHRIAWL+ VE  SP+SI++VT
Sbjct: 5   DLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVT 64

Query: 62  FTNKAAAEMRHRIDQLLGTGQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQLR 121
           FTNKAAAEMR RI+QLLG    GMW+GTFHGLAHRLLRAH  +A L Q+FQILDS+DQ R
Sbjct: 65  FTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSDDQQR 124

Query: 122 LLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEAC 181
           L+KR+++ L LDE++WP RQA W+ING+KDEGLRPQHI + G+    T   +Y AY++AC
Sbjct: 125 LIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAYEQAC 184

Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDGA 241
           +RAG++DF+ELLLRA +LW + P +L+HY+ RF ++LVDEFQDTN +QYAW+RLLA  G 
Sbjct: 185 ERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLARGGD 244

Query: 242 KVMIVGDDDQSIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHNG 301
            +M VGDDDQSIYGWRGA++ENI  +  DF D   IRLEQNYRST  IL AANALIA+N 
Sbjct: 245 SLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALIANNS 304

Query: 302 DRLGKNLWTDGIDGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSR 361
            RLGK LWTD  +GEP++LY A+NE DEAR+VV  I+   + G A +E AILYRSNAQSR
Sbjct: 305 GRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSNAQSR 364

Query: 362 VLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGDR 421
           VLEEALL++ +PYRIYGG RFFER EIK+A++YLRL+  R +DAA ERV+N P RGIG++
Sbjct: 365 VLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRGIGEK 424

Query: 422 TLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQT 481
           T++ +R+ AR  QL++W+A   L+  K L GRAA+AL  F+EL++ LA+   D+PLH  T
Sbjct: 425 TVEAIREHARHSQLSMWEAMCQLIAAKALKGRAASALGAFIELIEGLAAKVVDMPLHTMT 484

Query: 482 DRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAALE 541
              I  SGL + +++EKGEKGQARVENLEELV+A R F   DED DL PL AFL HA+LE
Sbjct: 485 QTTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGHASLE 544

Query: 542 AGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601
           AG+ QAD ++D++QLMTLHSAKGLEFP VF+VGMEEG+FP +MSL+E GRLEEERRLAYV
Sbjct: 545 AGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRLAYV 604

Query: 602 GVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPTECVEEVRLRASVSRP------VN 655
           G+TRAM++L +TYAE+RRLYG ETY++ SRF+ E+P   V+EVRL  SVSRP        
Sbjct: 605 GITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGAKTAT 664

Query: 656 HQRLGTPISQSDTGYKLGQRVRHAKFGEGTIVNVEGSGEHCRIQVAFAGQGIKWLVAAYA 715
           +  L    S   T + LGQRV+HA FGEG I+N EGSG   R+QV FA +G KWL+  YA
Sbjct: 665 NSNLFANASIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFA-EGSKWLMLGYA 723

Query: 716 RLDTV 720
           +L+ V
Sbjct: 724 KLEAV 728