Pairwise Alignments

Query, 278 a.a., proline/glycine betaine ABC transporter permease from Dickeya dianthicola ME23

Subject, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 15/221 (6%)

Query: 61  AWRIGKGF---ALFTLLATLYIIYSG------YSD----HAAVTLALTLSSTFFSLLIGI 107
           A R GKG    A+   L  L + + G      Y D    +    L L L S   +L++GI
Sbjct: 2   AIRYGKGLIGGAVVVALLALLVHWIGINTIELYRDDLLFYLQAHLILVLVSMLAALVVGI 61

Query: 108 PLGIWSARRATVGSIVRTLLDFM--QTMPAFVYLIPATILFGLGRPPGIFATILFSMPPV 165
           P GI  +R   VG   R +  F    T+P    L  A  + G+G  P IFA  L S+ P+
Sbjct: 62  PAGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIGSGPAIFALFLASLLPI 121

Query: 166 VRLTDLGIRQVNVARLEAGIAFGCTPWQLLWKVQLPAAQPSIMAGINQTIMMAMSMVIIA 225
           VR T  G++ V  +  EA +  G TP Q+L++V+LP A P I+ G+   + + +    +A
Sbjct: 122 VRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIGGVRVALAINVGTAPLA 181

Query: 226 SMVGAGGLGNDILSSIQQLEIGLGLQSGLVVVLMAILLDRL 266
            ++GA  LG+ I   I        L       L+A+LLD L
Sbjct: 182 FLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGL 222



 Score = 26.6 bits (57), Expect = 5e-04
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 52  LVIIAVGLGAWRIGKGFALFTL-LATLYII----YSGYSD------HAAVTLALTLSSTF 100
           L ++A+ LG   IG G A+F L LA+L  I    Y G  +       AAV + +T     
Sbjct: 92  LAVLAIALGVLGIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVL 151

Query: 101 FSLLI--GIPLGIWSARRATVGSIVRTLLDFM 130
           F + +   +P+ I   R A   ++    L F+
Sbjct: 152 FRVELPNAVPIIIGGVRVALAINVGTAPLAFL 183