Pairwise Alignments

Query, 278 a.a., proline/glycine betaine ABC transporter permease from Dickeya dianthicola ME23

Subject, 354 a.a., glycine betaine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  225 bits (573), Expect = 1e-63
 Identities = 122/265 (46%), Positives = 173/265 (65%), Gaps = 4/265 (1%)

Query: 4   PLDFSRQIDAAIHAMLAHDGGFFDGVARVIDGFAGGLEELVGALSPWGLVIIAVGLGAWR 63
           PLD    +   I  ++ H    F GV   +D    G ++L+  + P  + II   L AW+
Sbjct: 63  PLD--SWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGM-PAPVAIIVFALIAWQ 119

Query: 64  I-GKGFALFTLLATLYIIYSGYSDHAAVTLALTLSSTFFSLLIGIPLGIWSARRATVGSI 122
           I G G  + TL++ + I   G    A VTLAL L++  F ++IG+PLGIW AR      I
Sbjct: 120 ISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKI 179

Query: 123 VRTLLDFMQTMPAFVYLIPATILFGLGRPPGIFATILFSMPPVVRLTDLGIRQVNVARLE 182
           +R LLD MQT PAFVYL+P  +LFG+G  PG+  TI+F++PP++RLT LGI QV    +E
Sbjct: 180 IRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIE 239

Query: 183 AGIAFGCTPWQLLWKVQLPAAQPSIMAGINQTIMMAMSMVIIASMVGAGGLGNDILSSIQ 242
           A  +FG +P Q+L+KVQLP A P+IMAG+NQT+M+A+SMV+IASM+  GGLG  +L  I 
Sbjct: 240 ASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIG 299

Query: 243 QLEIGLGLQSGLVVVLMAILLDRLS 267
           +L++GL    G+ +V++AI+LDRL+
Sbjct: 300 RLDMGLATVGGVGIVILAIILDRLT 324