Pairwise Alignments

Query, 702 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 334 a.a., membrane-fusion protein from Magnetospirillum magneticum AMB-1

 Score =  199 bits (507), Expect = 1e-55
 Identities = 127/338 (37%), Positives = 183/338 (54%), Gaps = 7/338 (2%)

Query: 366 IALVVYHFFIKVLGIVLMLVEIGWFIALPVVKEAYIWWSMRKIAHPV--SLLRSGLILAA 423
           +A++VYHFFIK +GI+L  VEIGWF+ LP   EA  WW  R+       SLL  G  +A 
Sbjct: 1   MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVAT 60

Query: 424 VLVVLLFPWRGSIRVPAVLEAENVSVLYAPLSAQVKTLYATDGQRVTAGEVLLELTSSDL 483
            LV+ L PWR  +  PAV++AE    LYA   A+++ +   +G++V  GE L  L+S DL
Sbjct: 61  -LVLALVPWRAHVSAPAVMKAERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDL 119

Query: 484 DYRINIERQRIAVLQQQRQRGAGRQETAGETQVLDRQLAESLARYRGLDAQRQRLSITAP 543
           +YR+    +RI VL+ +    +        +Q L  +L  ++A    L  +  RLS+TAP
Sbjct: 120 EYRLAQVERRILVLEYELASFSFDASFRERSQALREELETAIAERVSLQRELARLSVTAP 179

Query: 544 QAGQVRDAARDMTEGRWLTTDMPLLRVVEQGAGKVQGYLPEDTLTRAKTGMTGNFIADDP 603
            AG+V D   D+  G+W++    L ++   GA  V+ ++ E  + R + G  G F+ADDP
Sbjct: 180 MAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDP 239

Query: 604 AYPRLAVQLTDIAPTGTAWLQQEMLASDRHGPIAVRRDRDHNPQPVQAQYRVRFVVLEGP 663
             P L  ++  I       L + +LAS   GPI VR  +D +  P QA YR+R V   G 
Sbjct: 240 GRPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRA-KDKSLVPDQALYRIRCV---GT 295

Query: 664 FLPPQQPLRGSVMLEGETESILGAVWRRVAALGIRESG 701
                  LRG  +L+ E ESI G + R  AA  +RESG
Sbjct: 296 IPAQATQLRGMAVLKAEPESIAGFILRSAAAALLRESG 333