Pairwise Alignments

Query, 460 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Dickeya dianthicola ME23

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas putida KT2440

 Score =  149 bits (375), Expect = 3e-40
 Identities = 127/467 (27%), Positives = 212/467 (45%), Gaps = 38/467 (8%)

Query: 2   RIHILGICGTFMGGLALLARSQGHQVTGSDANVYPPMSTLLEEQGITLTPGYDPAQLDPA 61
           RIH +GI G  M G+A +  + G++V+GSD     P++  LE  G  +  G+  A+    
Sbjct: 18  RIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKA-SPVTERLESFGAEIFVGHR-AENAAT 75

Query: 62  PDLVVIGNAMTRGNPCVEAVLEQNIPYMSGPQWLHDHVLRERWVIAVAGTHGKTTTAGMV 121
            D++V+ +A+   NP V   LE+ IP +   + L + ++R R  +AVAGTHGKTTT  ++
Sbjct: 76  ADVLVVSSAINPANPEVATALERRIPVVPRAEMLAE-LMRYRHGVAVAGTHGKTTTTSLL 134

Query: 122 TWILEDCGYQPGFVIGGVPGNFSVSARLGESPFFVVEADEYDCAFFDKRSKFVHYSPRTL 181
             +    G  P FVIGG       +A+LG S + + EADE D       + F+H  P   
Sbjct: 135 ASVFAAGGLDPTFVIGGRLTAAGTNAQLGTSRYLIAEADESD-------ASFLHLQPMVA 187

Query: 182 ILNNLEFDHADIFD-DLKAIQKQFHHLVRLVPGKGRIIVPSHDLHLKQVMGMGCWSEQEL 240
           ++ N++ DH   ++ D   ++K F   +  +P  G  ++   D  +++++      ++  
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQ---VKRPT 244

Query: 241 V----GEEGIWKAKKVTTDA--SVFQVYLNDLLVGEVTWNLVGEHNMHNGLMAIAAARHV 294
           V     EE   +A  V      + F V   D    EV+ N+ G HN+ N L  IA A   
Sbjct: 245 VTYGFSEEADIRAINVRQQGMQTHFTVLRRDREPLEVSVNMPGNHNVLNALATIAIATDE 304

Query: 295 GVPPAEACRALGGFINARRRLELRG----TAYRVSVYDDFAHHPTAILATLAALRSKVGG 350
           G+      + L GF    RR ++ G        V + DD+ HHPT + A + A+R   G 
Sbjct: 305 GITDEAIVQGLSGFQGVGRRFQVYGELPVEGGSVMLVDDYGHHPTEVAAVIKAVRG--GW 362

Query: 351 TARILAVLEPRSNTMKMGHCKNELAPALGRADGVFL---FQPQHIPWQVAEVADAC---- 403
            +R L ++       +     ++    LG A+ + L   +     P   A+    C    
Sbjct: 363 PSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLLLMEVYPAGEEPIPGADSRQLCHSIR 422

Query: 404 ----VQPAYWSADIDTLVEMISKTAQPGDHILVMSNGSFGNIHNKLL 446
               + P Y     + L  ++    + GD +L    G  G +  +L+
Sbjct: 423 QRGKLDPIYIERGAE-LAPLVKPLLRAGDILLCQGAGDVGGLAPQLM 468