Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

 Score =  338 bits (866), Expect = 3e-97
 Identities = 206/447 (46%), Positives = 263/447 (58%), Gaps = 7/447 (1%)

Query: 4   VSLRQLADVLGARLVGEDLTISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNHGAA 63
           +SL QL   L  + +G D T + VS D+R ++ G LFVAL G +FD HDY AD    GA 
Sbjct: 5   LSLSQLTTALKGQHIGGDATFTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAV 64

Query: 64  ALLVSKHLP-IEVPQLVVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEMTAAIL 122
           A LV + +  +++PQL V D RLALG +    R      VVA+TGSSGKT+VKEM A+IL
Sbjct: 65  AALVEREVADVDLPQLQVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLASIL 124

Query: 123 RQCGNVLYTAGNFNNDIGVPLTLFRLAPEHDYAVIELGANHIGEIAYTTAMVRPEAALVN 182
           R  G V  T GN NND+G PLTL  +APEH  AVIELGA+ IGEI YT  + +P+  ++N
Sbjct: 125 RTRGLVHATRGNLNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQPQVVIIN 184

Query: 183 NLAAAHLEGFGSLDGVAQAKGEIFSGLPAQGVAIVNADSHDEARWHDALTGKTRWRFSPQ 242
           N   AH+  FG  D + +AKGEI  GL   G+AI+N D      W  A  G  +     +
Sbjct: 185 NAGTAHVGEFGGPDKIVEAKGEILEGLGQGGIAILNLDDKAFDIW-KARAGAHKVVSFAR 243

Query: 243 ARAGVDFYASDVGISERG-TDFVLHTPAGAVAVTLPLPGRHNIANALAAAALSLAVGAPL 301
           +    DF+ASD+G   RG   F LH     VAV L + G HN++NALAAAA + AVG  L
Sbjct: 244 SNPKADFHASDIGRDARGCPSFTLHGAGETVAVQLNVLGEHNVSNALAAAAAAHAVGLSL 303

Query: 302 DAVKTGLAQLQAVPGRLFPIALAPGKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGD 361
             +  GLA +Q V GR        G  ++DDSYNAN  SM AA  +LA   G  V+V+GD
Sbjct: 304 SGIAAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFSGRTVLVLGD 363

Query: 362 MAELGLGAQACHRQVGEAARKANIDKVLSVGTLSAFIGDVSGA-GEHFDNKTALIDRLRT 420
           + ELG  A+  HRQVG+ AR   +D + +VG+         GA G HF  +  LID +  
Sbjct: 364 IGELGQWAEEGHRQVGDYAR-GKVDALYAVGSNMTHAVKAFGANGRHFATQAELIDAVS- 421

Query: 421 LVTQHNTITVLIKGSRSAAMEQVVHAL 447
                +  T+LIKGSRSAAME VV AL
Sbjct: 422 -AENASDTTILIKGSRSAAMENVVAAL 447