Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 820 a.a., alanine racemase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  143 bits (360), Expect = 2e-38
 Identities = 127/463 (27%), Positives = 210/463 (45%), Gaps = 30/463 (6%)

Query: 4   VSLRQLADVLGARLV--GEDLTISEVSTDTRKLTTG--CLFVALRGEKFDAHDYAADAVN 59
           ++L++L  +   +L+  G   +++ +STD+RK+  G   LFVAL+G K + HDY  DA +
Sbjct: 5   LTLQELLLITNGQLLHQGHHPSVTAISTDSRKIYHGKQTLFVALKGFKVNGHDYLMDAFS 64

Query: 60  HGAAALLVS--KHLP--IEVPQLVVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVK 115
            G    +V   KH+    +   +VV     AL  +A W R Q    V+ +TGS+GKT +K
Sbjct: 65  KGVRTFIVENDKHISPLTDCTIIVVKSALEALQALAKWNRNQFSGVVIGITGSNGKTIIK 124

Query: 116 EMTAAILRQCGNVLYTAGNFNNDIGVPLTLFRLAPEHDYAVIELGANHIGEIAYTTAMVR 175
           E    IL    ++  +  ++N+  GVPL++F +   H  A+IE G +  GE+A    +++
Sbjct: 125 EWLGQILASRFDIAKSPKSYNSQTGVPLSIFGIENHHKAAIIEAGISLPGEMAKLQTIIQ 184

Query: 176 PEAALVNNLAAAHLEGFGSLDGVAQAKGEIFSGLPAQGVAIVNADSHDEARWHDALTGK- 234
           P   ++ N+  AH EGF S       K  +F        A +     D A  H ALT + 
Sbjct: 185 PNIGIMTNIGTAHAEGFSSQAEKLHEKLLLFKD------AQLIVYRKDHAAIHRALTDQF 238

Query: 235 -----TRWRFSPQARAGVDFYASDVGISERGTDFVLHTPAGAVAVTLPLPGRHNIANALA 289
                  W   P    G D+  S     E     ++    G            ++ N   
Sbjct: 239 PSDRLVSWSDQP----GGDYTLSTKKEKEGSKLTLIKPDLGLFTFHSHFTDEASLENLRH 294

Query: 290 AAALSLAVGAPLDAVKTGLAQLQAVPGRLFPIALAPGKLLLDDSYNANVGSMTAAAQVL- 348
               +L +G     ++  +  L  V  RL   A     LL+DD+YN ++  +  A + L 
Sbjct: 295 TIVAALVLGLSETQIQQSIPVLDTVEMRLTLKAGIHQCLLIDDTYNNDLAGLDIALEFLN 354

Query: 349 AEMPGYR-VMVVGDMAELGLGAQACHRQVGEAARKANIDKVLSVGT-LSAFIGDVSGAGE 406
           ++ P  R ++++ D+ + G    + +  V        +D V +VG+ +       S    
Sbjct: 355 SQRPKKRKILILSDLLQAG-DKSSVYDSVSNLISHYQLDMVFAVGSDIGQLKAPPSCTVN 413

Query: 407 HFDNKTALIDRLRTLVTQHNTITVLIKGSRSAAMEQVVHALQE 449
            F +   L+++L T   Q + I  LIKG+R    E+VV ALQE
Sbjct: 414 FFRDTAHLLEKLPTYALQDDLI--LIKGARIFQFERVVDALQE 454