Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

 Score =  211 bits (537), Expect = 4e-59
 Identities = 142/392 (36%), Positives = 206/392 (52%), Gaps = 17/392 (4%)

Query: 24  ISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNHGAAALLVSK-HLP----IEVPQL 78
           I+ +S D+R +  G  F A++G++ D HDY + AV +GA+ L+V++  LP    + VP +
Sbjct: 26  ITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALGRLTVPMI 85

Query: 79  VVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEMTAAILRQCGNVLYTAGNFNND 138
           VV+D   ALG +A   R+++ AR++A+TGS GKT+ KEM    L   G V     +FNN 
Sbjct: 86  VVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVASFNNH 145

Query: 139 IGVPLTLFRLAPEHDYAVIELGANHIGEIAYTTAMVRPEAALVNNLAAAHLEGFGSLDGV 198
            GVPLTL R+  + ++ V E+G NH GEI     MVRP  A++  +A AHL  F +++ +
Sbjct: 146 WGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIITTIAPAHLGNFKNIEEI 205

Query: 199 AQAKGEIFSGLPAQGVAIVNADSHDEARWHDALTG---KTRWRFSPQARAGVDFYASDVG 255
           A AK EIF G+   G  I+N D+    +  +A      +    F   A+A  DF  +D  
Sbjct: 206 AAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGIEHILTFGQHAKA--DFRLADFE 263

Query: 256 ISERGTDFVLHTPAGAVAVTLPLPGRHNIANALAAAALSLAVGAPLDAVKTGLAQLQAVP 315
            +  G+            + + +PGRH   NA+A        GA LD     L  L+AV 
Sbjct: 264 STTTGSTIWAILNGETSELHINIPGRHIADNAMAVLGAVAVTGANLDRALEALGTLEAVK 323

Query: 316 GR--LFPIALAPGK-LLLDDSYNANVGSMTAAAQVLAEMP----GYRVMVVGDMAELGLG 368
           GR     + +  G  LL+D+SYNAN  SM AA  VLAE      G RV V+GDM E+G  
Sbjct: 324 GRGQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETETQGHGRRVAVLGDMLEMGEF 383

Query: 369 AQACHRQVGEAARKANIDKVLSVGTLSAFIGD 400
           +   H ++      A I+ V   G   A + D
Sbjct: 384 SAQLHEELAGPLLAAGIEHVWLAGEAMAALRD 415