Pairwise Alignments

Query, 505 a.a., sensor domain-containing diguanylate cyclase from Dickeya dianthicola ME23

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 3e-39
 Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 11/221 (4%)

Query: 290 VYHRKVYSPTE-DEIASIEKSAQLVAV-----AIERYRAIDMLRRSEEHYRQLAHYDSLT 343
           V+HR++    +  +I ++E S + + +      +   R +  L+ ++   R LA++D LT
Sbjct: 608 VHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLT 667

Query: 344 SLANGLTFAEQMEQAIQLSRQTHRKIALMFLDLDKFKQINDTFGHATGDLLLKEAAARMR 403
           +L N     +++ Q I L ++ + + AL+FLDLD FK IND+ GH  GD +LK   AR+ 
Sbjct: 668 NLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLE 727

Query: 404 GAVRETDTVYRRSGDEFIILLQGIK-----EVENTLYVADKIHHALNEPFYIEGKKLDIS 458
            +VR  DTV R  GDEF++LL G++       E    +AD +   L EP  ++G++L ++
Sbjct: 728 ASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVT 787

Query: 459 CSIGIALYPEHGTDSLTLAINADAAMYQAKALGRSQTQIYH 499
            SIG+AL P+HGT    L   AD A+Y+AK  GR+ TQ++H
Sbjct: 788 PSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFH 828



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 9/180 (5%)

Query: 15  ISSARSRKFQEKANAEQKKQDFLNMVFFAAEYSPSSIMIANE-SCEIVYVNRQFTVMSGY 73
           +++ R    Q++A A  K  +       A   SP +I I    S   + VN  F  ++GY
Sbjct: 516 VTTLRDITQQQRAEAALKSSE--EKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGY 573

Query: 74  EAEEVIGR---KTNILSSGMTNASVYEELWSTLNKGEIWNGEFINRKKNGQLYWEKASIV 130
             +EVIG    +  I +     +++  EL     +G + + E + R K G +   + S+ 
Sbjct: 574 STDEVIGHTVYEIGIWADDKQRSALLAEL---RERGRVHHREMLGRNKRGDILTVEVSVE 630

Query: 131 KIYNKASDAVQYVSIKMDITERKTQEHHDNSYNRALELLSSGAPLKDILDAIIFSVEEKN 190
            I     D +   +  +   +    +    +Y+  L  L + A L D L   I  ++  N
Sbjct: 631 PITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHN 690



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 47  SPSSIMIANESCEIVY-VNRQFTVMSGYEAEEVIGRKTNILSSGMTNASVYEELWSTLNK 105
           SP++I++      +++ VN+ F  M G+   +VIG+ +  L   +     ++ + ST   
Sbjct: 167 SPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKTSLELGLWVNPEQRHQIVESTRAN 226

Query: 106 GEIWNGEFINRKKNGQLYWEKASIVKIYNKASDAVQY-VSIKMDITERKTQEHHDNSYNR 164
           G     E   R  +G+++     I+       + V + +S  +D TERK  E        
Sbjct: 227 GGPLIMEVQFRATSGKVH---DGILCTQGIELEGVTFLISTFVDTTERKRAEQALKDSQE 283

Query: 165 ALELLSSGAPL 175
            L+L    A L
Sbjct: 284 RLDLALDSAQL 294