Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dianthicola ME23

Subject, 695 a.a., Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) from Sphingobium sp. HT1-2

 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 30/207 (14%)

Query: 65  PIWQDSRVYAADRHGTVKALDLNSGEEKWRADLAEKTGLLSSNRPALLSGGVAVSGNHVY 124
           PI  D  +Y A  +  V A+D  +G E W  D           R A  S G+A     VY
Sbjct: 73  PIAVDGILYYASGYSVVHAVDAATGHELWTYDPQSWKVADQKMRGAWGSRGIAYDNGAVY 132

Query: 125 VGSERAQLFALNADDGTLQWQTKVAGE-----VLSSPVVSDGMVIIHTS-------NGML 172
           VG+   +L A+NA  G   W T+  G+     +  +P V +G V+I           G +
Sbjct: 133 VGTIDGRLIAINARTGHRLWSTQTIGKDDERYISGAPWVFNGKVLIGHGGADFAPIRGYV 192

Query: 173 QALSESDGTIKW---TVNLDMPSLSLRGESAPTAA---------FGAAIVGGD----NGR 216
            A  +  G   W   TV  D P L    ++   AA         +G      +    + +
Sbjct: 193 TAYDQKTGKQLWRFYTVPGD-PKLGFENKAMAMAAKTWTGEWWKYGGGGTAWNAMAYDPK 251

Query: 217 VSAVMINQGQ-LIWQQRISQPGGATEI 242
            + + I  G    W Q+I  PGG   +
Sbjct: 252 YNRIYIGVGNGSPWNQKIRSPGGGDNL 278



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 142 LQWQTKV--AGEVLSSPVVSDGMVIIHTSNGMLQALSESDGTIKWTVN------LDMPSL 193
           L W   +   G  L++P+  DG++   +   ++ A+  + G   WT +       D    
Sbjct: 57  LAWYQDIDGGGSSLTAPIAVDGILYYASGYSVVHAVDAATGHELWTYDPQSWKVADQKMR 116

Query: 194 SLRGESAPTAAFGAAIVGGDNGRVSAVMINQGQLIW 229
              G        GA  VG  +GR+ A+    G  +W
Sbjct: 117 GAWGSRGIAYDNGAVYVGTIDGRLIAINARTGHRLW 152



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 26/132 (19%)

Query: 227 LIWQQRISQPGGATEIARLNDVDTTPVVASNVVYALGYNGNLTALDLRSGQITWK----- 281
           L W Q I   GG + +       T P+    ++Y       + A+D  +G   W      
Sbjct: 57  LAWYQDID--GGGSSL-------TAPIAVDGILYYASGYSVVHAVDAATGHELWTYDPQS 107

Query: 282 --------REIGSVNDFIVDGDRIYLVDQDDRITALNTNGGVVIWRQ---GDLLHRNLT- 329
                   R          D   +Y+   D R+ A+N   G  +W     G    R ++ 
Sbjct: 108 WKVADQKMRGAWGSRGIAYDNGAVYVGTIDGRLIAINARTGHRLWSTQTIGKDDERYISG 167

Query: 330 APALYNGYLVVG 341
           AP ++NG +++G
Sbjct: 168 APWVFNGKVLIG 179