Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dianthicola ME23

Subject, 631 a.a., quinoprotein ethanol dehydrogenase from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 31  KMSPLPQVT--NQFTPTKVWSRSVGDGIGEFYSNLHPIWQDSRVYAADRHGTVKALDLNS 88
           + SPL QV   N F  T  WS S GD       +   I  D  VY    +  V ALD  +
Sbjct: 71  RWSPLAQVNDKNVFKLTPAWSYSFGDEKQRGQES-QAIVSDGVVYVTGSYSRVFALDAKT 129

Query: 89  GEEKWRADLAEKTGLLSSNRPA--LLSGGVAVSGNHVYVGSERAQLFALNADDGTLQWQ- 145
           G+  W         L  + RP   +++ G A+ G+ +Y G+  A++ AL+   G + W  
Sbjct: 130 GKRLW----TYNHRLPDNIRPCCDVVNRGAAIYGDKIYFGTLDARVIALDKRTGKVVWNK 185

Query: 146 ---------TKVAGEVLSSPVVSDGMVIIHTSNG 170
                    T     VL     S  +++IH S+G
Sbjct: 186 KFGDHSAGYTMTGAPVLIKDKTSGKVLLIHGSSG 219



 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 11/83 (13%)

Query: 249 DTTPVVASNVVYALGYNGNLTALDLRSGQITWKRE------IGSVNDFI-----VDGDRI 297
           ++  +V+  VVY  G    + ALD ++G+  W         I    D +     + GD+I
Sbjct: 103 ESQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIYGDKI 162

Query: 298 YLVDQDDRITALNTNGGVVIWRQ 320
           Y    D R+ AL+   G V+W +
Sbjct: 163 YFGTLDARVIALDKRTGKVVWNK 185



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 14/141 (9%)

Query: 154 SSPVVSDGMVIIHTSNGMLQALSESDGTIKWTVNLDMPSLSLRGESAPTAAFGAAIVGGD 213
           S  +VSDG+V +  S   + AL    G   WT N  +P  ++R         GAAI G  
Sbjct: 104 SQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPD-NIR-PCCDVVNRGAAIYGDK 161

Query: 214 ------NGRVSAVMINQGQLIWQQRISQPG------GATEIARLNDVDTTPVVASNVVYA 261
                 + RV A+    G+++W ++           GA  + +        ++  +    
Sbjct: 162 IYFGTLDARVIALDKRTGKVVWNKKFGDHSAGYTMTGAPVLIKDKTSGKVLLIHGSSGDE 221

Query: 262 LGYNGNLTALDLRSGQITWKR 282
            G  G L A D  +G+  W R
Sbjct: 222 FGVVGQLFARDPDTGEEVWMR 242



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 2/88 (2%)

Query: 198 ESAPTAAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGATEIARLNDVDTTPVVASN 257
           ES    + G   V G   RV A+    G+ +W      P        +  V+    +  +
Sbjct: 103 ESQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDV--VNRGAAIYGD 160

Query: 258 VVYALGYNGNLTALDLRSGQITWKREIG 285
            +Y    +  + ALD R+G++ W ++ G
Sbjct: 161 KIYFGTLDARVIALDKRTGKVVWNKKFG 188



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 215 GRVSAVMINQGQLIWQQRISQPGGATEIARLNDVDTTPVVASNVVYALGYNGNLTALDLR 274
           G + A+    G+L+W+ +   P  A  +A             N+V+    +G   A D +
Sbjct: 508 GTLRAMDPTTGKLVWEHKEHLPLWAGVLA----------TKGNLVFTGTGDGFFKAFDAK 557

Query: 275 SGQITWKREIGSVNDFIVDGDRIYLVDQDDRITALNTNGGVVIWRQGDLLHRNLTAPALY 334
           +G+  WK + GS    IV     +  D +  I      GG V    GD+    LT P   
Sbjct: 558 TGKELWKFQTGS---GIVSPPITWEQDGEQYIGVTVGYGGAVPLWGGDM--AELTKPVAQ 612

Query: 335 NG 336
            G
Sbjct: 613 GG 614



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 17/126 (13%)

Query: 281 KREIGSVNDFIVDGDRIYLVDQDDRITALNTNGGVVIWRQGDLLHRNL--------TAPA 332
           +++ G  +  IV    +Y+     R+ AL+   G  +W     L  N+           A
Sbjct: 97  EKQRGQESQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAA 156

Query: 333 LYNGYLVVGDAEGYLHWVNTTDGRFVVQQKVD----GSGLLSKPVVASDK-----LLVQA 383
           +Y   +  G  +  +  ++   G+ V  +K      G  +   PV+  DK     LL+  
Sbjct: 157 IYGDKIYFGTLDARVIALDKRTGKVVWNKKFGDHSAGYTMTGAPVLIKDKTSGKVLLIHG 216

Query: 384 KDGEVY 389
             G+ +
Sbjct: 217 SSGDEF 222