Pairwise Alignments

Query, 285 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

Subject, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

 Score =  213 bits (541), Expect = 5e-60
 Identities = 112/281 (39%), Positives = 164/281 (58%), Gaps = 1/281 (0%)

Query: 5   RFFRSVMAVCVVGAAAAFCAGVQAKEWKSVTIATEGSYEPWNLTLPGGKLGGFEPELMTL 64
           +FF       VV          QAK++KS+TIATEGSY P+N    GGKL GF+ +L   
Sbjct: 2   KFFNLNALAAVVTGVLLAAGPTQAKDYKSITIATEGSYAPYNFKDAGGKLIGFDIDLGND 61

Query: 65  LCQRMNIQCKLVVQNWDGMIAGLQAGKFDVMMDAIVITPERKQVVAFSLPYASTPASFIT 124
           LC+RMNI+CK V Q WDG+I  L AG++D +M A+ I P R++V+AFS PY  TP +F+T
Sbjct: 62  LCKRMNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLT 121

Query: 125 VKGKLALPVEADKTMIKLASDPAQIKPAVANLRRALQGKTIGIASGTVYTPFIDSYFRDV 184
                 L  +     + L +   + K  +    +  +G   G+ +GT +  F+      V
Sbjct: 122 TADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSV 181

Query: 185 ATVREYTASADAILDLQAGRIDAVFDDVTFANSIIGKPENNNLTLGGPQLTGPIWGEGEA 244
             +  Y    + ++DL+AGRIDA    V+F   +  KP+N +L + GP++TG ++G+G  
Sbjct: 182 -QISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVG 240

Query: 245 LGFRKSDPELKAKFDAAIKTALADGTVKTLSEKWFKTDVTP 285
           +G RK D +LKA FD AI  A+ADGTV+ LS++WF  D +P
Sbjct: 241 VGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASP 281