Pairwise Alignments

Query, 599 a.a., NADH-quinone oxidoreductase subunit C/D from Dickeya dianthicola ME23

Subject, 600 a.a., NADH:ubiquinone oxidoreductase, fused CD subunit from Escherichia coli BL21

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 527/599 (87%), Positives = 563/599 (93%), Gaps = 3/599 (0%)

Query: 1   MTDLTMHDAALPAWQTRDHLDDPVVSELCNRFGPEAFTVQATRTGLPVVWVKREQLLDVV 60
           MTDLT  +   PAWQTRDHLDDPV+ EL NRFGP+AFTVQATRTG+PVVW+KREQLL+V 
Sbjct: 5   MTDLTAQE---PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVG 61

Query: 61  AFLKKQPKPYVMLHDLHGVDERLRTHRQGLPDADFTVFYHLISIERNRDIMLKVALSEND 120
            FLKK PKPYVML DLHG+DERLRTHR+GLP ADF+VFYHLISI+RNRDIMLKVAL+END
Sbjct: 62  DFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND 121

Query: 121 LSMPTLIKLFPNANWYEREVWDMFGITFKGHPHLTRIMMPQTWQGHPLRKDFPARATEFD 180
           L +PT  KLFPNANWYERE WD+FGITF GHP+L RIMMPQTW+GHPLRKD+PARATEF 
Sbjct: 122 LHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 181

Query: 181 PFVLTKQREDMEMESLTFKPEEWGMTRGTDNEDFMFLNLGPNHPSAHGAFRIILQLNGEE 240
           PF LTK ++D+EME+LTFKPEEWGM RGT+NEDFMFLNLGPNHPSAHGAFRI+LQL+GEE
Sbjct: 182 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 241

Query: 241 IVDCIPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIEVPE 300
           IVDC+PDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI VP+
Sbjct: 242 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 301

Query: 301 RVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGYRMHPA 360
           RV VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITG+RMHPA
Sbjct: 302 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 361

Query: 361 WFRIGGVAHDLPRGWERLLREFLEWMPARLDTYVKAALQNSILKGRSQGVAAYNAKDALE 420
           WFRIGGVAHDLPRGW+RLLREFL+WMP RL +Y KAALQN+ILKGRSQGVAAY AK+ALE
Sbjct: 362 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 421

Query: 421 WGVTGAGLRATGIAFDVRKSRPYSGYENFDFEIPVGDGVSDCYSRVMLKVEELRQSLRIL 480
           WG TGAGLRATGI FDVRK+RPYSGYENFDFEIPVG GVSDCY+RVMLKVEELRQSLRIL
Sbjct: 422 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 481

Query: 481 EQCLKNMPEGPFKADHPLTTPPPKERTLQHIETLINHFLQVSWGPVMPANESFQMVEATK 540
           EQCL NMPEGPFKADHPLTTPPPKERTLQHIETLI HFLQVSWGPVMPANESFQM+EATK
Sbjct: 482 EQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATK 541

Query: 541 GVNSYYLTSDGSTMSYRTRIRTPSFPHLQQIPAVIRGCLVSDLIVYLGSIDFVMSDVDR 599
           G+NSYYLTSDGSTMSYRTRIRTPS+ HLQQIPA IRG LVSDLIVYLGSIDFVMSDVDR
Sbjct: 542 GINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 600