Pairwise Alignments

Query, 376 a.a., flagellar motor protein MotB from Dickeya dianthicola ME23

Subject, 308 a.a., protein that enables flagellar motor rotation from Escherichia coli BL21

 Score =  375 bits (964), Expect = e-109
 Identities = 202/308 (65%), Positives = 239/308 (77%), Gaps = 19/308 (6%)

Query: 1   MKHQ-HPII---RKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQI 56
           MK+Q HPII   R+K KS  AAH  GSWKIAYADFMTAMMA FLVMWLI+ISSP +L QI
Sbjct: 1   MKNQAHPIIVVKRRKAKSHGAAH--GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQI 58

Query: 57  AEYFRTPLKIAITSGPKISDASNPIPGGGSDPTQQEGDVKRQ--IDTMDGRLEEIKLNKL 114
           AEYFRTPL  A+T G +IS++ +PIPGGG D TQ +G+V +Q  I+ +  R+E+ +L KL
Sbjct: 59  AEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKL 118

Query: 115 RERLDQLIDADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRA 174
           R  LDQLI++DP+L+ALRPHL I++V EGLRIQIIDS NRPMF+TGSA VEPYM DILRA
Sbjct: 119 RGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRA 178

Query: 175 IAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSAERANASRRELIIGGLAEGKVLRV 234
           IAP+LN IPN+ISLSGHTDD  YA GE+GYSNWELSA+RANASRREL++GGL  GKVLRV
Sbjct: 179 IAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRV 238

Query: 235 VGMADTMNLKQAKGGSDAINRRISLVVLNKQAQENIERENAESSAINIDKIENLQNMGVD 294
           VGMA TM L   +G  DA+NRRISL+VLNKQA++ I  ENAES    +  +E        
Sbjct: 239 VGMAATMRLSD-RGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALE-------- 289

Query: 295 KSKPATAP 302
             KP  AP
Sbjct: 290 --KPEVAP 295