Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

Subject, 258 a.a., Flagellar biosynthetic protein fliR from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 2e-51
 Identities = 104/259 (40%), Positives = 162/259 (62%), Gaps = 10/259 (3%)

Query: 1   MVTLSSIDMISWFNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPH 60
           M+ L+   + +W   F  PL R+ A++ T PIF  R +  R++L + V + +V+ P++P 
Sbjct: 1   MLELTDTQIGTWVATFILPLFRVTAVLMTMPIFGTRMLPARIRLYVAVAVTVVIVPALP- 59

Query: 61  TSIPVF---SATGVWMLFQQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPS 117
             +P F   S  G+ +  +Q+++G + G A+QL F A  +AG+I+ +QMG++FA+  DP+
Sbjct: 60  -PLPEFDPLSLRGMLLCAEQIIVGALFGLALQLLFQAFVVAGQIVAVQMGMAFASMVDPA 118

Query: 118 GGPNMPVIARFMNLLALLLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGG 177
            G N+ VI++FM +L  +LFL MNGHL +  +L +SF T+P+ +  +  N F  LA   G
Sbjct: 119 NGVNVTVISQFMTMLVSVLFLLMNGHLVVFEVLTESFTTLPVGSALVV-NHFWELAGRMG 177

Query: 178 RIFSNGLMLALPLITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAG--ITTVGFLVFL 235
            +F  GL+L LP+I  LL +N+A G+++R APQL IF+IGFP+TL  G  I  VG L  +
Sbjct: 178 WVFGAGLLLILPVIAALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVMGMFIFWVG-LADV 236

Query: 236 LSPYAEKLFGETYDLLADL 254
           LS Y + L  ET   L +L
Sbjct: 237 LSHY-QALASETLQWLREL 254