Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

Subject, 264 a.a., Flagellar biosynthesis protein FliR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  328 bits (841), Expect = 7e-95
 Identities = 155/256 (60%), Positives = 203/256 (79%)

Query: 1   MVTLSSIDMISWFNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPH 60
           M+ ++S   + W + +FWPL+R+LALISTAPI +ERAI +RVKLGLG++I +V+ PS+P 
Sbjct: 1   MIQVTSEQWLYWLHLYFWPLLRVLALISTAPILSERAIPKRVKLGLGIMITLVIAPSLPA 60

Query: 61  TSIPVFSATGVWMLFQQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGGP 120
              P+FS   +W+  QQ+LIG+ LGF MQ AF A+R AGE IGLQMGLSFATF DP    
Sbjct: 61  NDTPLFSIAALWLAMQQILIGIALGFTMQFAFAAVRTAGEFIGLQMGLSFATFVDPGSHL 120

Query: 121 NMPVIARFMNLLALLLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRIF 180
           NMPV+AR M++LA+LLFL+ NGHLWLISLLVD+FHT+PI + P++ N FM LA AGG IF
Sbjct: 121 NMPVLARIMDMLAMLLFLTFNGHLWLISLLVDTFHTLPIGSNPVNSNAFMALARAGGLIF 180

Query: 181 SNGLMLALPLITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAGITTVGFLVFLLSPYA 240
            NGLMLALP+ITLLLT+N+ALGLL+R+APQL+IF IGFP+TL  GI  +  L+ L++P+ 
Sbjct: 181 LNGLMLALPVITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGIMLMAALMPLIAPFC 240

Query: 241 EKLFGETYDLLADLLN 256
           E LF E ++LLAD+++
Sbjct: 241 EHLFSEIFNLLADIVS 256