Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Dickeya dianthicola ME23

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score =  346 bits (888), Expect = e-100
 Identities = 187/307 (60%), Positives = 226/307 (73%), Gaps = 6/307 (1%)

Query: 1   MKTENPT---VQFLTVSAEEAGQRIDNFLRTRLKGVPKSMIYRILRKGEVRVNKKRIKPE 57
           M T  P    VQ + V+ E AGQRIDNFL T LKGVPK+++YRILRKGEVRVNK R+KPE
Sbjct: 1   MTTNTPPTSGVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPE 60

Query: 58  YKLLDGDELRIPPVRQSEREESAVSASLDKVSALADCILYEDDYLLLLNKPSGTAVHGGS 117
           YK+  GD +R+PPVR  ER+E A  A    +  L   I+YED  L+++NKP+G AVHGGS
Sbjct: 61  YKIQAGDIVRVPPVRLPERDEPAPVAQ-GLLQRLEAAIVYEDKALIVMNKPAGIAVHGGS 119

Query: 118 GLSFGVIEALRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRSKGMQKDYL 177
           GLSFGVIEALR LRP+A+ LELVHRLDRDTSG+L++AKKRS LR LH  LR  G+ K Y+
Sbjct: 120 GLSFGVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYM 179

Query: 178 ALVRGQWQSHCKAVQAPLLKNVLQSGERIVRVNNEGKPSETLFKVEERF-DCATLVRASP 236
           ALVRG W +  K V APLLK+ L+SGER+V VN EGK + TLF+V  RF D AT+V A P
Sbjct: 180 ALVRGHWPTSKKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARP 239

Query: 237 VTGRTHQIRVHAQYAGHPIAFDDRYGDREFDAQLAGTGLKRLFLHAQALRFEHPHTGETL 296
           +TGRTHQIRVH  +AGH IA D +YGD +F  ++   G KRLFLHA AL    P  GE L
Sbjct: 240 ITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYALTVPLPDGGE-L 298

Query: 297 RIEAPLD 303
           ++EAP+D
Sbjct: 299 KLEAPVD 305