Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Dickeya dianthicola ME23

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 5e-36
 Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 24/315 (7%)

Query: 13  VSAEEAGQRIDNFLRTRLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLLDGDELRIPPVR 72
           V +E  GQR+D           +S +   +++G + V+   ++P   +  G +L +   +
Sbjct: 11  VPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSQLALEAEQ 70

Query: 73  QSEREESAVSASLDKVSALADCILYEDDYLLLLNKPSGTAVHGGSGLSFG-VIEALRALR 131
           +++ E  A    LD        I+YEDD++L++NKP+G  VH  +G + G ++ AL    
Sbjct: 71  EAQGEWIAEDIELD--------IVYEDDHILVINKPAGLVVHPAAGHASGTLLNALLHHV 122

Query: 132 PEARFLE---LVHRLDRDTSGVLLVAKKRSALRSLHEQLRSKGMQKDYLALVRGQWQSHC 188
           P+   +    +VHRLD+DT+G+++VAK   A   L EQ++++ + + Y  +V G   +  
Sbjct: 123 PDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVTAGG 182

Query: 189 KAVQAPLLKNVLQSGERI-VRVNNEGKPSETLFKVEERFDCATLVRASPVTGRTHQIRVH 247
           K + AP+ ++    G R  + V + GKP+ + ++V +RF   T VR    TGRTHQIRVH
Sbjct: 183 K-IDAPIGRH---GGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVH 238

Query: 248 AQYAGHPIAFDDRYGDREFDAQLAGTGL-------KRLFLHAQALRFEHPHTGETLRIEA 300
             + G P+  D  YG R      A   +        R  LHA+ L   HP TGE ++ E+
Sbjct: 239 MAHVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWES 298

Query: 301 PLDAALRYCLQTLRQ 315
           PL     + L  L Q
Sbjct: 299 PLPDDFVWLLSLLNQ 313