Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Dickeya dianthicola ME23

Subject, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

 Score =  207 bits (528), Expect = 2e-57
 Identities = 134/383 (34%), Positives = 202/383 (52%), Gaps = 19/383 (4%)

Query: 599 FDTTPDQAQAINAVLSDMCRPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPT 658
           F  T  Q +  N +  D+ +   M RLV GDVG GKT VA  AA  A+E   QVA++ PT
Sbjct: 268 FQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVGAGKTVVAALAALQALEAGYQVALMAPT 327

Query: 659 TLLAQQHFDNFRDRFANWPVRIEMLSRFRSQKEQTQVLEQTQEGKVDILIGTHKLLQSDV 718
            +LA+QH+  F+       + +  L+     K +   LEQ   G   +++GTH L Q +V
Sbjct: 328 EILAEQHYITFKRWLEPLGIEVAWLAGKLKGKARAASLEQIANG-APMVVGTHALFQEEV 386

Query: 719 YWLDLGLLIVDEEHRFGVRHKERIKAMRANVDI----LTLTATPIPRTLNMAMSGIRDLS 774
            +  L L I+DE+HRFGV+ +  ++      ++    L +TATPIPRTL M+     D S
Sbjct: 387 RFKHLALAIIDEQHRFGVQQRLALRRKGVAGELCPHQLIMTATPIPRTLAMSAYADLDTS 446

Query: 775 IIATPPARRLAVKT-FVREYDSLVVREAILREILRGGQVYYLYNDVENIEKAA------- 826
           ++   P  R  V T  V +     V E +      G Q Y++   +E  E+         
Sbjct: 447 VLDELPPGRTPVNTVLVADSRRFEVVERVRAACAEGRQAYWVCTLIEESEELTCQAAEST 506

Query: 827 -QQLNELVPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIII 885
            ++L   + E ++ + HG+M+  +   +M +F      +LV TT+IE G+D+P+A+ +II
Sbjct: 507 YEELGSALGELKVGLIHGRMKPAEKAEIMAEFKAGNLQLLVATTVIEVGVDVPNASLMII 566

Query: 886 ERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSNDAHKRLEAIASLEDLGAGFAL 945
           E  +  GLAQLHQLRGRVGR    ++  LL   P  +S    +RL  +    D   GF +
Sbjct: 567 ENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPP--LSQIGRERLGIMRETND---GFII 621

Query: 946 ATHDLEIRGAGELLGEGQSGQME 968
           A  DLE+RG GE+LG  Q+G ++
Sbjct: 622 AEKDLELRGPGEMLGTRQTGLLQ 644