Pairwise Alignments

Query, 541 a.a., intermembrane transport protein PqiB from Dickeya dianthicola ME23

Subject, 766 a.a., paraquat-inducible protein B from Pseudomonas putida KT2440

 Score =  168 bits (426), Expect = 6e-46
 Identities = 93/303 (30%), Positives = 165/303 (54%), Gaps = 10/303 (3%)

Query: 10  WSPVWIVPIVTVLIGAWILFYHVSHQGPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESV 69
           WS +WI+P++ ++IG W+ +      G EI +   + EGI A KT +  + + VG V+S+
Sbjct: 15  WSAIWILPLIALMIGGWLAWQAYRDAGVEIEVRFESGEGIVANKTEVIYKGMPVGKVKSL 74

Query: 70  MLSE--DLHQVEIKARLNDGMDKLLSKDSAFWVVKPQIGREGVSGLGTLLSGSFIELQPG 127
           +L    D   V     +N   +  L+K + FW+VKP +   G+SGL TL+SG++I + PG
Sbjct: 75  VLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWLVKPSVSLAGISGLETLVSGNYIAVSPG 134

Query: 128 SGKEDSRAFKLLDSPPLASPDAQGIRIVLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDP 187
            G+   R   L  +PPL+  +  G+ + L +D+ G L    PV ++  +VG V++     
Sbjct: 135 EGERTKRFVALKVAPPLSDSEP-GLHLTLKADRLGSLNRDSPVFYKQIQVGRVKSYRLSE 193

Query: 188 TARKMQYQLFVAAPYDQLVTANVRFWKDSGVALNLSAQGMRVEMGSLSTLLSGGVSFDVP 247
               ++ ++F+   Y  LV  + RFW  SGV+++ S  G++V   SLS++++GG++F  P
Sbjct: 194 DQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDASLSGVKVRSESLSSIVAGGIAFATP 253

Query: 248 VGWEVGGQAHERDEFQLFDNQNSIQDSLYTEYKEYLLFFDESVRGLQAG-APVEFRGIRL 306
              +          F+L+++ ++ Q  +  + K           GLQAG  PV ++GI++
Sbjct: 254 EYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKL------SDYEGLQAGRTPVMYKGIQV 307

Query: 307 GTV 309
           G++
Sbjct: 308 GSL 310



 Score =  140 bits (352), Expect = 2e-37
 Identities = 80/284 (28%), Positives = 148/284 (52%), Gaps = 8/284 (2%)

Query: 30  YHVSHQGPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESVMLSEDLHQVEIKARLNDGMD 89
           +  +  G  + +  S+ EG+ AG+T +  + + VG ++++ + ++L     +  L+   +
Sbjct: 274 FDAAQAGIRVKVKLSDYEGLQAGRTPVMYKGIQVGSLKALKMEDNLASASAELTLDPLTE 333

Query: 90  KLLSKDSAFWVVKPQIGREGVSGLGTLLSGSFIELQPGS-GKEDSRAFKLLDSPPLASPD 148
             L   + FWVVKP I   G++GL  L+ G++I ++PG  G    R F+     P     
Sbjct: 334 DYLVDGTQFWVVKPSISLAGITGLEALVKGNYIAIRPGEKGARPEREFEARAKAPPLDLK 393

Query: 149 AQGIRIVLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPYDQLVTA 208
           A G+ +VL +D  G L  G PV +R  +VGSV++  F   + ++   + +   Y++LV  
Sbjct: 394 APGLHMVLFADTLGSLEIGSPVTYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNG 453

Query: 209 NVRFWKDSGVALNLSAQGMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHERDEFQLFDNQ 268
           + RFW  SG+ L     G++++  SL TL++GG++FD P   +V  + H    F+L D+Q
Sbjct: 454 SSRFWNVSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRP-DVPLKRH-IPRFRLHDSQ 511

Query: 269 NSIQDSLYTEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVAEV 312
            ++  +        +    +   GL+ G  + FRG+ +G++  V
Sbjct: 512 EAVNRA-----GTLITIRVDRADGLKPGTAIRFRGLDVGSIESV 550



 Score =  130 bits (328), Expect = 1e-34
 Identities = 76/238 (31%), Positives = 127/238 (53%), Gaps = 5/238 (2%)

Query: 32  VSHQGPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESVMLSEDLHQVEIKARLNDGMDKL 91
           V+  G  IT+    A+G+  G T I+ R ++VG +ESV L++DL  V ++AR+ +  D++
Sbjct: 514 VNRAGTLITIRVDRADGLKPG-TAIRFRGLDVGSIESVDLTDDLQAVLLRARITESADRI 572

Query: 92  LSKDSAFWVVKPQIGREGVSGLGTLLSGSFIELQPGS-GKEDSRAF-KLLDSPPLASPDA 149
               + FWVVKP +G      L TL+ G ++E+QP +  +   R F  L ++P +A P+ 
Sbjct: 573 ARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAAKNRGPQRDFIALAEAPEVAGPEV 632

Query: 150 QGIRIVLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPYDQLVTAN 209
            G+ + L++ + G +  G PV +R   VG V       +A ++   + +   Y  LV + 
Sbjct: 633 -GLPLTLSAPRRGSIKPGVPVTYREVTVGKVTGFELGQSADRVLIHILIEPRYAALVRSG 691

Query: 210 VRFWKDSGVALNLSA-QGMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHERDEFQLFD 266
            RFW  SG   +    +G  V   S+ TL+ GG++F  P G ++G  A  +  F LF+
Sbjct: 692 SRFWNSSGFGFDWGLFKGATVRTESVETLIDGGIAFATPDGEQMGNPARPQQTFALFE 749



 Score = 54.3 bits (129), Expect = 2e-11
 Identities = 77/335 (22%), Positives = 132/335 (39%), Gaps = 37/335 (11%)

Query: 59  RSVNVGVVESVMLSEDLHQVEIKARLNDGMDKLLSKDSAFWVVKPQIGREGVSG------ 112
           + + VG V+S  LSED   VE+K  +      L+ K + FW          +SG      
Sbjct: 179 KQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDASLSGVKVRSE 238

Query: 113 -LGTLLSGSFIELQPGSGKED-----SRAFKLLDSPPLASPDAQGIRIVLN-SDQSGQLT 165
            L ++++G      P   K+      S  F+L +    A     GIR+ +  SD  G   
Sbjct: 239 SLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQA---GIRVKVKLSDYEGLQA 295

Query: 166 AGDPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPYDQLVTANVRFWKDSGVALNLSAQ 225
              PV+++G +VGS++    +        +L +    +  +    +FW    V  ++S  
Sbjct: 296 GRTPVMYKGIQVGSLKALKMEDNLASASAELTLDPLTEDYLVDGTQFWV---VKPSISLA 352

Query: 226 GMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHERDEFQLFDNQNSIQDSLYTEYKEYLLF 285
           G+      L  L+ G      P      G+   R E +      +    L       +LF
Sbjct: 353 GIT----GLEALVKGNYIAIRP------GEKGARPEREFEARAKAPPLDLKAPGLHMVLF 402

Query: 286 FDESVRGLQAGAPVEFRGIRLGTVAEVPFFPRNLPQSFGSDYRIPVLVRIEPGRLKRGLR 345
            D ++  L+ G+PV +R +++G+V     F RN      +   I V +  E  +L  G  
Sbjct: 403 AD-TLGSLEIGSPVTYRQVKVGSVQSYQ-FARN-----SNRILIGVHIEKEYEKLVNGSS 455

Query: 346 DQINLEQQLSKGAVSGLR-ASMKTANLLTGALYVD 379
              N+      G +SG++  S     L+ G +  D
Sbjct: 456 RFWNVSGITLTGGLSGIKIKSESLQTLMAGGIAFD 490