Pairwise Alignments

Query, 517 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  248 bits (634), Expect = 3e-70
 Identities = 169/520 (32%), Positives = 263/520 (50%), Gaps = 50/520 (9%)

Query: 1   MRKNYPVSQRQYPLDAKTKLMSVTTPDSHITYANADFINVSGYEPEELMNQPHNIIRHPD 60
           MR N PV+QR+    A+ +L+S T     ITY N  F+ +SG+  +EL+  PHN++RHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60

Query: 61  MPPSAFADMWNTLKAGKIWTGVVKNRCKNGDHYWVRSSTTPLKRDGKLMGYMSVRTAATA 120
           +PP+ FA MW+TLK G  W G+VKNRCK GDHYWV +  TP+    +++GY SVR   TA
Sbjct: 61  VPPAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120

Query: 121 EEISQAEALYAQVNQGTLGNRAFHHGLLVYTGPLKWLSLFKAMPLRWRI----RSYFGLL 176
           E+I +AEALY ++NQG          L V      WL       L + I     S++G  
Sbjct: 121 EQIRRAEALYHRINQGKSAIPQRDKWLPVLQ---DWLPFILVSQLSFMIGASLNSHWGFA 177

Query: 177 GGLPLAVAFALLPKTALIWGLFPALMALACLFCELLVQQV---ARPVEQILEQAMRSAAG 233
               L+V   LL  +    GL   L        + L+ Q+   +R  +  LE ++ S   
Sbjct: 178 LAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQ-- 235

Query: 234 QANSLTPLNRADEIGMLMRAVNQSGMNFRTFVDDVNSNLQELKIACSEIAQGNHILAECC 293
           +A   T L R  +       +N       T   + +S L+  ++   ++A          
Sbjct: 236 EARLKTCLTRLQDTA---EHLNDQAAQSNTLAHNSSSGLERQRVETEQVA---------- 282

Query: 294 EKTEESLQQTAASVEQLTATIKSNADASQRASQ-------YAQDVNQVVNVGEQAVSEVA 346
                ++ Q AA+ +++ + ++  ADA+Q A++        A +  + +     AV E  
Sbjct: 283 ----TAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETG 338

Query: 347 NTMQAITRASERITNIIGVLDNLAFQTNILAINAAVEAAHAGEQGKSFAVVASEVRSLAQ 406
            T+  + + S+ I  ++ V+  +A QTN+LA+NAA+EAA AGE G+ FAVVA EVR LAQ
Sbjct: 339 VTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQ 398

Query: 407 RSAASAKDIAALIDN-------TLSSIRAGDQQ-------VVHTNRSMNNILVKVQDVTH 452
           R+A S   I ALI          + ++ AG +Q       V+  ++++  I   V  +T 
Sbjct: 399 RTAESTGQIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITD 458

Query: 453 LMNDISLATQEQSQGLQQINDAVNRIDELTHQNTALASQS 492
           +   I+ AT+EQS   ++I+  ++ I  L  Q +  A  S
Sbjct: 459 MTTQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNS 498



 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 22/175 (12%)

Query: 213 VQQVARPVEQI--LEQAMRSAAGQANSLTPLNRADEIGMLMRAVNQSGMNFRTFVDDVNS 270
           V Q+A+  ++I  +   ++  A Q N L  LN A E         + G  F    D+V  
Sbjct: 341 VTQLAKDSDEIGGVVDVIKGIADQTNLLA-LNAAIEAAR----AGEMGRGFAVVADEVRQ 395

Query: 271 NLQELKIACSEIAQGNHILAECCEKTEESLQQTAASVEQLTATIKSNADAS----QRASQ 326
             Q    +  +I    H L          LQQTAA+  Q        A+        A Q
Sbjct: 396 LAQRTAESTGQI----HALIA-------KLQQTAAAAVQTMDAGHRQAEEGVARVMEADQ 444

Query: 327 YAQDVNQVVNVGEQAVSEVANTMQAITRASERITNIIGVLDNLAFQTNILAINAA 381
               +++ V       +++A   +  +  +E I+  I  +  LA QT+  A+N+A
Sbjct: 445 ALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSA 499