Pairwise Alignments

Query, 1168 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola ME23

Subject, 1160 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit from Pseudomonas putida KT2440

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 626/1161 (53%), Positives = 757/1161 (65%), Gaps = 36/1161 (3%)

Query: 6    LQPGLMAIHSNHPEALRNVLVSWMAANPLGGLENELILVQSNGIGQWLKLALARDTRD-- 63
            L PG M +H N  + LR+++VSWM   PL  LENE+ LVQSNGI QWLKLALA D  +  
Sbjct: 7    LHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAEDPLEDD 66

Query: 64   -GGCGVAAALDIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLTQPEF 122
             GGCG+AAA+D+QLP  F WQ+YRSVLG  ++PE S  DK+ L WRL+RLLP L+ +P F
Sbjct: 67   QGGCGIAAAIDVQLPGSFMWQLYRSVLGRSEIPEVSLLDKAPLTWRLMRLLPALIERPHF 126

Query: 123  AALARFLHQDTDLRKHYQLAERLADLFDQYQVYRADWLAQWAAGDDVLATSRRGVEPLPE 182
              L RFL  D+DLRK YQLAERLADLFDQYQVYRADWL  WA G+ V+ T+R   + LP 
Sbjct: 127  EPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWATGEHVINTARGERKVLPP 186

Query: 183  DQRWQPLLWRALLRDTGEALSGTSRAALHRRFLDEVQRRGDADRPAGLPSRVMVFGISSL 242
              RWQ  LWRALL D GE     SRA +H+RF++ +     A  PAGLP RV+VFGISSL
Sbjct: 187  GNRWQAELWRALLEDVGEQGMAQSRAGVHQRFIERINSLEQA--PAGLPPRVIVFGISSL 244

Query: 243  PQQALELLAAIGRWIQIFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIALEE 302
            P QALE LA + R+ Q+ +CVHNPC H+W +I+ADKDLLR +  RQQRK GMP  +  + 
Sbjct: 245  PAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQLDDQT 304

Query: 303  LHQHAHPLLAAWGKQGRDYIGLLDEYDQREQYEPLLQPLISRIDLFDSNGEDCLLNQLQE 362
            LHQHAHPLLAAWGKQGRDYI LLD YD    Y+ +      RIDLF       LLN+LQ+
Sbjct: 305  LHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSD--GRIDLFSDGSPTTLLNELQD 362

Query: 363  DIRDLRPLTESRARWPAIDPYQDSSIRFHVAHSAQREVEVLHDQLLAAFAADPTLRPRDV 422
            DI +LRPL ESR RWPA+D  +D SIRFH+AHS QREVE+LHDQLLA F+ADPTLRPRDV
Sbjct: 363  DILELRPLAESRERWPAVDTTKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPRDV 422

Query: 423  IVMVPDINGYAPHIQAVFGLIDRQDSRYIPFSVADRGPRQNNLLLAALERLLNLPQSRVA 482
            IVM+PDI+ YAPHI+AVFG + R D RYIPF++ D+G R    LL ALE LL LP SR A
Sbjct: 423  IVMLPDIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSRFA 482

Query: 483  VSDVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHARQRQSLDLPDAPEQNSWF 542
            VS+VLDLL+VPAVR RF I E  LP L RWI  A +RWGL A QR SL LP   EQNSW 
Sbjct: 483  VSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLDAAQRASLGLPAGLEQNSWR 542

Query: 543  FGLRRMLLGYAVGAGDAWRDIEPLDEIGGLDAVPAGQLALLLDRLDYSWQQLCQPATPIQ 602
            FGLRRMLLGYAVG G+A   IEP DEIGGLDA   G L  LLD L+ + Q L +PAT  Q
Sbjct: 543  FGLRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVACQALSEPATVSQ 602

Query: 603  WGERLRALLNTFFAADEGEDGFMLLQLDEGLQNWLEACESVALEQALPLSVVREHWLGLF 662
            WGERL ALL+ FF A++  D F+L+QL +   +WLE CE+V L   LPL+VVRE WL   
Sbjct: 603  WGERLHALLHVFFLAEDEGDEFLLMQLQDLRDSWLEVCETVGLHDPLPLTVVREAWLSGL 662

Query: 663  EQSSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRNRVPLDFDLMGQDYRPGD 722
            +Q  L+Q F AG+V F TLMPMRAIPFR VCLLGMNDGDYPR + PLDFDLM  DYRPGD
Sbjct: 663  DQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRPGD 722

Query: 723  RSRREDDRYLFLEALLSARERLYLSWVGRSIHDNSERPPSVLVAQLRDHLSNGWRTAD-- 780
            RSRREDDRYL LEALLSAR++LY+SWVGRSI DNSERP SVL+ QLRDH++ GW  AD  
Sbjct: 723  RSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHIAAGWHLADAQ 782

Query: 781  -------GQDVLPALTVEHRLQPFSPDYFTAGSPLFSYAREWRAGLLPQDGLLPQHAPAT 833
                   G+ +L ALT EH LQPFSP YF  GSPLFSYA EW+  +L Q G   +    +
Sbjct: 783  QGQPARPGEQLLHALTQEHPLQPFSPRYFQKGSPLFSYAHEWQ--VLHQQG---ETDAQS 837

Query: 834  DAALDEYRQDGVLTLRQLADFARDPVRSFFRLRLNVWFEQEDATSQDQEPFAIDALENWR 893
            +  L  Y+    L+L QL DF R PVR FF  RL V+FE  +A + D+EPF +D L+ + 
Sbjct: 838  EPGLPPYQDAEALSLHQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFVLDTLQRYG 897

Query: 894  LQHELIQVQKAALHQRIPREQALTEQLARIARRGELAPGGFTAVLEQDLAEPMADLFTRY 953
                L+    AAL +    EQAL  Q  R+   G L   GF  +L+ +L EP+ DL  R+
Sbjct: 898  ASESLL---GAALAEPDNAEQALRAQARRLQACGLLPLAGFGELLQNELIEPLPDLLQRH 954

Query: 954  EQERETWP---EPAPDEPLSLPDLPLEDWLNELRTDGQGNRCRLVLESGGLLHPTRRSYR 1010
            +Q  + WP   E A           LE WL  +    +      +      +   R + +
Sbjct: 955  QQLLQRWPQLVEGALPVHFEHGQHRLEGWLGRV-FQAEDQSLLSITTVPNTISAGRNNLK 1013

Query: 1011 LDKLVPFWVAHLAGHLGGQPLHSTLVSKNGTVYLPALEPEQAKAYWQTLVEAWREGMRYP 1070
              +L+  WV HLA    G P +S LV+ + T+ L  L   QA      L+ A +  M  P
Sbjct: 1014 WHRLIAPWVTHLAACAAGYPYNSALVASDLTLLLAPLPQAQAAQLLGDLLVARQAAMNAP 1073

Query: 1071 LPLAVKTGFRWLEAGGEPEQPPDGEAGKAARQCYEEHDPANRKFAESASNAYLARAFPNF 1130
            LP+A KT F WL       Q    +A  AA + YE  +     F E + +  LAR F +F
Sbjct: 1074 LPVAAKTAFAWL------AQDDADKALAAAARAYEGDE--RTSFGERSESIALARQFRDF 1125

Query: 1131 DQLWANGEFARWAQLLLAPLY 1151
              L A+  F  W + L  PL+
Sbjct: 1126 AALTADETFEGWCETLYRPLF 1146