Pairwise Alignments

Query, 1168 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola ME23

Subject, 1123 a.a., Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  619 bits (1595), Expect = 0.0
 Identities = 425/1117 (38%), Positives = 582/1117 (52%), Gaps = 112/1117 (10%)

Query: 10   LMAIHSNHPEALRNVLVSWMAANPLGG-LENELILVQSNGIGQWLKLALARDTRDGGCGV 68
            L   HSN  + L  ++   +    L    E E+ILVQS G+ QWL++ L++       G+
Sbjct: 2    LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-----GI 56

Query: 69   AAALDIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLTQPEFAALARF 128
            AA +   LP+ F W+++  VL +  +P+ S F K  + W+L+ LLP+LL + EF  L  +
Sbjct: 57   AANIAFPLPASFIWEMFVRVLPD--IPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRHY 114

Query: 129  LHQDTDLRKHYQLAERLADLFDQYQVYRADWLAQWAAGDDVLATSRRGVEPLPEDQRWQP 188
            L  DTD RK +QL+ R ADLFDQY VYR DWL QW AG        + VE L E Q WQ 
Sbjct: 115  LTDDTDKRKLFQLSARAADLFDQYLVYRPDWLTQWEAG--------KTVEGLGEAQNWQA 166

Query: 189  LLWRALLRDTGE-ALSGTSRAALHRRFLDEVQRRGDADRPAGLPSRVMVFGISSLPQQAL 247
             LW+AL+  T         RA L++RF+  ++       P GLPSRV + GIS+LP   L
Sbjct: 167  PLWKALVEYTAALGQPRWHRANLYQRFIQTLESATAC--PPGLPSRVFICGISALPPVYL 224

Query: 248  ELLAAIGRWIQIFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIALEELHQH- 306
              L A+G+ I+I +   NPC +YWG+I  D   L    ARQ+R       + L   +Q+ 
Sbjct: 225  RALQALGKHIEIHLLFTNPCRYYWGDI-KDPAWLAKLMARQRRHSFEDRHLPLFRENQNP 283

Query: 307  ------------AHPLLAAWGKQGRDYIGLLDEYDQREQYEPLLQPLISRIDLFDSNGED 354
                         +PLLA+WGK GRDYI LL E +  ++           +D F     D
Sbjct: 284  EALFNSDGEQDIGNPLLASWGKLGRDYIYLLSELENSQE-----------LDAFVDITPD 332

Query: 355  CLLNQLQEDIRDLRP-------LTE-SRARWPAIDPYQDSSIRFHVAHSAQREVEVLHDQ 406
             LL+++Q DI +L         L E SR+    +   +D+S+ FHV HS QREVE+LHD+
Sbjct: 333  NLLHRIQADILELESHAVAGVNLEEYSRSDNKRLLDPEDNSLSFHVCHSPQREVEILHDR 392

Query: 407  LLAAFAADPTLRPRDVIVMVPDINGYAPHIQAVFGLIDRQDSRYIPFSVADRGPRQNNLL 466
            LLA   ADPTL PRD+IVMV DI+ Y+P IQAVFG    +  RY+P++++DR  RQ++ +
Sbjct: 393  LLAMLEADPTLTPRDIIVMVADIDSYSPFIQAVFGSAPTE--RYLPYAISDRRARQSHPV 450

Query: 467  LAALERLLNLPQSRVAVSDVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHARQ 526
            L A   LL+LP SR    DVL LL+VP +  RF I EE L  L+ W+  + +RWG+    
Sbjct: 451  LQAFISLLSLPDSRFVSEDVLALLDVPVLAARFTINEEGLRYLRLWVNESGIRWGIDDDN 510

Query: 527  RQSLDLPDAPEQNSWFFGLRRMLLGYAV-GAGDAWRDIEPLDEIGGLDAVPAGQLALLLD 585
             + L+LP A  Q++W FGL RMLLGYA+  A   W+ + P DE  GL A   G LA LL 
Sbjct: 511  VRELELP-ATGQHTWQFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569

Query: 586  RLDYSWQQLCQPATPIQWGERLRALLNTFFAADEGEDGFMLLQLDEGLQNWLEA-CESVA 644
            +L+   + L Q     +W    R + N FF  D   +  M L      Q W     E VA
Sbjct: 570  QLNIWRRGLAQERPLEEWLPVCRDMFNDFFLPDADTEAAMTLIE----QQWQAIIAEGVA 625

Query: 645  LE--QALPLSVVREHWLGLFEQSSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDY 702
             E   A+P+S++R+      +Q  ++Q F AG +   TLMPMR+IPFR VCLLGMNDG Y
Sbjct: 626  AEYGDAVPISLLRDELAQRLDQERISQRFLAGPINICTLMPMRSIPFRVVCLLGMNDGVY 685

Query: 703  PRNRVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYLSWVGRSIHDNSERPPS 762
            PR   PL FDLM Q    GDRSRR+DDRYLFLEAL+SA++ LY+S++GRSI DNSER PS
Sbjct: 686  PRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEALISAQQTLYISYIGRSIQDNSERFPS 745

Query: 763  VLVAQLRDHLSNG-------WRTADGQD--VLPALTVEHRLQPFSPDYFTAGSPLFSYAR 813
            VLV +L D++            T D  +  V   +T  H   PF    +  G    SYAR
Sbjct: 746  VLVQELVDYIGQSHYLPGDETLTCDESEARVKAHITRLHTRMPFDAQNYQPGEQQ-SYAR 804

Query: 814  EWRAGLLPQDGLLPQHAPATDAALD-----EYRQDGVLTLRQLADFARDPVRSFFRLRLN 868
            EW          LP  + +  A  D      +     LTL  L  F   PVR+FF++RL 
Sbjct: 805  EW----------LPAASQSGKAHSDFVQPLPFTMPETLTLESLQRFWAHPVRAFFQMRLQ 854

Query: 869  VWFEQEDATSQDQEPFAIDALENWRLQHELIQVQKAALHQRIPREQALTEQLARIARRGE 928
            V F  E++   D EPF ++ L  ++L  +L+          +  E        R    GE
Sbjct: 855  VNFRSEESEIPDAEPFELEGLTRYQLNQQLLNT--------LVEEDDAERLFRRFRAAGE 906

Query: 929  LAPGGFTAVLEQDLAEPMADLFTRYEQERETWPEPAPDEPLSLPDLPLEDWLNELRTDGQ 988
            L  G F  +      + M  L +R    R+  P  + +  L    + L  WL +++ D  
Sbjct: 907  LPYGAFGEIFWDAQCQEMQQLASRVIACRK--PSQSLEVDLLCNGVQLTGWLPQVQED-- 962

Query: 989  GNRCRLVLESGGLLHPTRRSYRLDKLVPFWVAHLAGHLGGQPLHSTL-VSKNGTVYLPAL 1047
                       GLL        + + V  W+ HL     G    S L + K G    P L
Sbjct: 963  -----------GLLRWRPALISVAQGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPL 1011

Query: 1048 EPEQAKAYWQTLVEAWREGMRYPLPLAVKTGFRWLEA 1084
            +  QA AY   L+E +REGM  PL +  ++G  W++A
Sbjct: 1012 DKTQAMAYLAQLIEGYREGMSSPLLVLPESGGAWIKA 1048