Pairwise Alignments

Query, 1168 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola ME23

Subject, 1122 a.a., exonuclease V (RecBCD complex), gamma chain from Escherichia coli BL21

 Score =  615 bits (1585), Expect = e-180
 Identities = 418/1112 (37%), Positives = 583/1112 (52%), Gaps = 104/1112 (9%)

Query: 10   LMAIHSNHPEALRNVLVSWMAANPLGG-LENELILVQSNGIGQWLKLALARDTRDGGCGV 68
            L   HSN  + L  ++   +    L    E E+ILVQS G+ QWL++ L++       G+
Sbjct: 2    LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-----GI 56

Query: 69   AAALDIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLTQPEFAALARF 128
            AA +D  LP+ F W ++  VL   ++P+ S F+K  + W+L+ LLP+LL + +F  L  +
Sbjct: 57   AANIDFPLPASFIWDMFVRVL--PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114

Query: 129  LHQDTDLRKHYQLAERLADLFDQYQVYRADWLAQWAAGDDVLATSRRGVEPLPEDQRWQP 188
            L  D+D RK +QL+ + ADLFDQY VYR +WLAQW  G          VE L E Q WQ 
Sbjct: 115  LTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETG--------HLVEGLGEAQAWQA 166

Query: 189  LLWRALLRDTGE-ALSGTSRAALHRRFLDEVQRRGDADRPAGLPSRVMVFGISSLPQQAL 247
             LW+AL+  T E       RA L++RF++ ++       P GLPSRV + GIS+LP   L
Sbjct: 167  PLWKALVEYTHELGQPRWHRANLYQRFIETLESATTC--PPGLPSRVFICGISALPPVYL 224

Query: 248  ELLAAIGRWIQIFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIALEELHQHA 307
            + L A+G+ I+I +   NPC +YWG+I  D   L     RQ+R       + L    ++A
Sbjct: 225  QALQALGKHIEIHLLFTNPCRYYWGDI-KDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283

Query: 308  -------------HPLLAAWGKQGRDYIGLLDEYDQREQYEPLLQPLISRIDLFDSNGED 354
                         +PLLA+WGK GRDYI LL + +  ++           +D F     D
Sbjct: 284  GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVDVTPD 332

Query: 355  CLLNQLQEDIRDLR----------PLTESRARWPAIDPYQDSSIRFHVAHSAQREVEVLH 404
             LL+ +Q DI +L             + S  + P +DP  DSSI FHV HS QREVEVLH
Sbjct: 333  NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP-LDPL-DSSITFHVCHSPQREVEVLH 390

Query: 405  DQLLAAFAADPTLRPRDVIVMVPDINGYAPHIQAVFGLIDRQDSRYIPFSVADRGPRQNN 464
            D+LLA    DPTL PRD+IVMV DI+ Y+P IQAVFG       RY+P++++DR  RQ++
Sbjct: 391  DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG--SAPADRYLPYAISDRRARQSH 448

Query: 465  LLLAALERLLNLPQSRVAVSDVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHA 524
             +L A   LL+LP SR    DVL LL+VP +  RF I EE L  L++W+  + +RWG+  
Sbjct: 449  PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508

Query: 525  RQRQSLDLPDAPEQNSWFFGLRRMLLGYAV-GAGDAWRDIEPLDEIGGLDAVPAGQLALL 583
               + L+LP A  Q++W FGL RMLLGYA+  A   W+ + P DE  GL A   G LA L
Sbjct: 509  DNVRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567

Query: 584  LDRLDYSWQQLCQPATPIQWGERLRALLNTFFAADEGEDGFMLLQLDEGLQNWLEACESV 643
            L +L+   + L Q     +W    R +LN FF  D   +  M L +++  Q  +      
Sbjct: 568  LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGA 626

Query: 644  ALEQALPLSVVREHWLGLFEQSSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYP 703
                A+PLS++R+      +Q  ++Q F AG V   TLMPMR+IPF+ VCLLGMNDG YP
Sbjct: 627  QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686

Query: 704  RNRVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYLSWVGRSIHDNSERPPSV 763
            R   PL FDLM Q  + GDRSRR+DDRYLFLEAL+SA+++LY+S++GRSI DNSER PSV
Sbjct: 687  RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746

Query: 764  LVAQLRDHLSNGWRTADGQDVLPA----------LTVEHRLQPFSPDYFTAGSPLFSYAR 813
            LV +L D++        G + L            LT  H   PF P  +  G    SYAR
Sbjct: 747  LVQELIDYIGQS-HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ-SYAR 804

Query: 814  EWRAGLLPQDGLLPQHAPATDAALDEYRQDGVLTLRQLADFARDPVRSFFRLRLNVWFEQ 873
            EW            +        L E      + L  L  F   PVR+FF++RL V F  
Sbjct: 805  EWLPAASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRT 859

Query: 874  EDATSQDQEPFAIDALENWRLQHELIQVQKAALHQRIPREQALTEQLARIAR-RGELAPG 932
            ED+   D EPF ++ L  +++  +L+             EQ   E+L R  R  G+L  G
Sbjct: 860  EDSEIPDTEPFILEGLSRYQINQQLLNALV---------EQDDAERLFRRFRAAGDLPYG 910

Query: 933  GFTAVLEQDLAEPMADLFTRYEQERETWPEPAPDEPLSLPDLPLEDWLNELRTDGQGNRC 992
             F  +  +   + M  L  R    R+  P  + +  L+   + +  WL +++ D      
Sbjct: 911  AFGEIFWETQCQEMQQLADRVIACRQ--PGQSMEIDLACNGVQITGWLPQVQPD------ 962

Query: 993  RLVLESGGLLHPTRRSYRLDKLVPFWVAHLAGHLGGQPLHSTL-VSKNGTVYLPALEPEQ 1051
                   GLL        + + +  W+ HL     G    S L + K+G    P L  EQ
Sbjct: 963  -------GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015

Query: 1052 AKAYWQTLVEAWREGMRYPLPLAVKTGFRWLE 1083
            A  Y   L+E +REGM  PL +  ++G  WL+
Sbjct: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047