Pairwise Alignments

Query, 1236 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola ME23

Subject, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas simiae WCS417

 Score = 1227 bits (3175), Expect = 0.0
 Identities = 671/1237 (54%), Positives = 823/1237 (66%), Gaps = 54/1237 (4%)

Query: 13   LRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGG-EQAFSRPLNPPEILVVTFTDAAT 71
            L FPL GS+LIEASAGTGKTFTI+ LY+RLVLGHGG E +F R L PP+ILVVTFTDAAT
Sbjct: 8    LAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESSFGRELLPPQILVVTFTDAAT 67

Query: 72   RELRDRIRARLAQAAGYFQPDGKDGKDGKDDKDDKDDEADPLLRALRADYPPEQWPACAR 131
            +ELR+RIR RLA+AA +F+              ++ ++ D L+  LRADY PEQWPACA 
Sbjct: 68   KELRERIRIRLAEAARFFR--------------EEIEQPDALIADLRADYLPEQWPACAN 113

Query: 132  KLQLAAEWMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFF 191
            +L +AA+WMDEAAVSTIH WC RML EHAFDSGSLF QTLETD SD+L EV+RDYWR F 
Sbjct: 114  RLDIAAQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFC 173

Query: 192  FPLDARDVLELRDSWSSPEHFYRSVTPLLEYADEIGIDDL--PAQIFSAVREEKTRQLTA 249
            +P+    +  +R  W  P      V  L  +  E   D+   PA++ +A  +E+   LT 
Sbjct: 174  YPMHDDALNWVRSHWGGPAALMPRVRAL--FGSERPTDETREPAELITACLQERREALTT 231

Query: 250  LKAPWPQWCGELRDLLNAAVAQKKADGRKLQARYFEAWLDKLQHWAASDETT--LDIGTG 307
            LKAPW QW  ELRD+   AVA K  DGRK+QARYFE W +K+  WAA DET   LDIGTG
Sbjct: 232  LKAPWQQWATELRDICLQAVAAKAVDGRKMQARYFEPWFEKISAWAA-DETLEQLDIGTG 290

Query: 308  WTRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRSQLLRHACRWVSQRFRHE 367
            +TRLTP G+ E WK   E PQHP + AM  L+  L  LP P + +L+HA  WV +RF  E
Sbjct: 291  FTRLTPDGMAEAWK--GEPPQHPGIDAMAGLKAALDALPTPDAAVLQHAAGWVGKRFEEE 348

Query: 368  QESRAQMGFQDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYR 427
            +  RA+MGF D+L RL+AAL+ D GERLA  +R QFPVA+IDEFQDTDP+QY IFD++YR
Sbjct: 349  KRRRAEMGFDDMLIRLNAALQADGGERLASVVREQFPVALIDEFQDTDPVQYSIFDSIYR 408

Query: 428  VADNDPQQGLILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGAVN 487
            + +N    GL LIGDPKQAIYAFRGADIYTYLRAR+ T GRH+TLGTNFRS+ AMV AVN
Sbjct: 409  IEENHLDSGLFLIGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVN 468

Query: 488  QVFMQAENRADGAGAFLFRQPDGGNPVPFLPVQANGRDEAWILEGAAAAALTCWTLATDQ 547
             VF +AE    G GAFLFR+PDG NPVPF  V + GR E   ++G    A+  W L TDQ
Sbjct: 469  HVFQRAET---GRGAFLFREPDGVNPVPFHSVLSQGRKEQLQVDGQTLPAMNLWHLPTDQ 525

Query: 548  PLSSAEYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAMA 607
            P+S+  YRQ++AA CA  +V LL  G QG AGF  P  + + VRP D+A+LV  G+EA A
Sbjct: 526  PVSNVIYRQQLAAACATHIVELLNGGQQGSAGFLQPDGSFKGVRPSDIAILVRDGKEAQA 585

Query: 608  VRAQLSARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALATPLLGLSWQ 667
            VR +L+ARGVRSVYLSD++SVF + +A +L  WL ACA+P+ +R LRAALA   L LS  
Sbjct: 586  VRGELAARGVRSVYLSDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLA 645

Query: 668  ALDRLNHDEQEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFDVPRRLLA-ADNARALTD 726
             L+RLN DE  WE RVMQF  Y++ WR QGVLPMLRRL+ +F +P+ L+A +D  R LT+
Sbjct: 646  ELERLNQDELAWESRVMQFRGYRTIWRTQGVLPMLRRLLHDFKLPQTLIARSDGERVLTN 705

Query: 727  VLHLSELLQQASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVHKSKG 786
            +LHLSELLQQA+  LDGE ALIR+LAE        G+   LRLESD  LVKVVT+HKSKG
Sbjct: 706  LLHLSELLQQAASELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKG 765

Query: 787  LEYPLVFLPFACAFRAVNQRDVPLKYHDDDGQPRLELTASDEAVQRADHERLGEDLRKFY 846
            LEY LVFLPF C+ + V+   +PL YHD++G+  + L  + E + +AD+ERL EDLR FY
Sbjct: 766  LEYDLVFLPFICSAKPVDGSRLPLHYHDENGKSHVSLRPTPELIAQADNERLAEDLRLFY 825

Query: 847  VALTRARYALWLGMAPLKE-------LEKSAPGYLLGAGEPL-EPAQLAQ---PLSAWCG 895
            VALTRA++A WLG+A LK        L  SA GYLLGAG  L E A LA+    L   C 
Sbjct: 826  VALTRAKHACWLGIADLKRGNSNNSVLHLSALGYLLGAGASLGESAGLARWLLDLQEGCT 885

Query: 896  AHSRMAPLPETDDEVYRAELNTPALGQEPPLPDMR-RHRWRITSYSGLQLAPEGHYREFR 954
            A      +PE  D ++    N   L + P LP  +    W I SYS L++          
Sbjct: 886  A-IHYGQVPEAQDNLFHPPRNEATL-RAPLLPKRKAAENWWIASYSALRIGDSMSAATLE 943

Query: 955  EPSAGDVPEVQSAQQETFSEPQAFAEHLPPLPAGLDMYSFPRGAAPGSFLHGLLEWAGKE 1014
             P +   P+ Q    +   +P A  E      +G D++ FPRG  PG+FLHGLLEWAG++
Sbjct: 944  APES---PQAQKLFDDERLDPDAPRE---VAASGGDIHRFPRGPNPGTFLHGLLEWAGED 997

Query: 1015 GFAALAAERHRVEDQVARRCNRQGWTQWIPMLTDWLMALLSQPLALPTSPGSAVSLAGLT 1074
            GF         +E  V  RCNR+ W  WI  L+ WL  LL  PL +     S VSL+GL 
Sbjct: 998  GFNVTP---EAIEKAVGARCNRRNWEGWIITLSSWLGHLLQTPLPV---NNSHVSLSGLQ 1051

Query: 1075 QYQVEMEFWFALSQVDTQVLDQQVSAATLAGEPRAVLMREQLNGMLKGFIDLVFEHQGRY 1134
            QYQ+EMEFWFA  +VD   LD+ V   T  G  R       LNGM KGFIDL FEH GRY
Sbjct: 1052 QYQIEMEFWFASHKVDVLALDKLVCQYTHNGVSRVAAEPVLLNGMFKGFIDLTFEHDGRY 1111

Query: 1135 YVLDYKSNWLGADAADYDPPRMARAMLDHRYDLQLALYLFALHRLLKSRLPDYDYDRHVG 1194
            YV DYKSNWLG D + Y    M +++LDHRYDLQ  LYL ALHR LK+RLPDYDYDRHVG
Sbjct: 1112 YVADYKSNWLGPDDSAYTFDAMEQSILDHRYDLQYVLYLLALHRQLKARLPDYDYDRHVG 1171

Query: 1195 GALYLFLRSSQAPGGGVFAQRPDWALMEALERLFSGE 1231
            GALY+FLR +Q+   G +  RP   L+E L+ LF G+
Sbjct: 1172 GALYIFLRGTQSASQGAYFTRPPRELIEGLDLLFQGK 1208