Pairwise Alignments

Query, 1236 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola ME23

Subject, 1181 a.a., Exodeoxyribonuclease V beta chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  754 bits (1946), Expect = 0.0
 Identities = 499/1253 (39%), Positives = 689/1253 (54%), Gaps = 106/1253 (8%)

Query: 10   LDVLRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPEILVVTFTDA 69
            LD LR PL G RLIEASAGTGKTFTIA LY+RL+LG GG  AF RPL   E+LVVTFT+A
Sbjct: 8    LDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEA 67

Query: 70   ATRELRDRIRARLAQAAGYFQPDGKDGKDGKDDKDDKDDEADPLLRALRADYPPEQWPAC 129
            AT ELR RIR+ + +       +  D               +PL   L  +   ++    
Sbjct: 68   ATEELRGRIRSNIHELRIACLRESTD---------------NPLYARLLEEISDKK--QA 110

Query: 130  ARKLQLAAEWMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRT 189
            A+ L LA   MDEAAV TIHG+C RML  +AF+SG LF Q L  D+S +  +   D+WR 
Sbjct: 111  AQWLLLAERQMDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRR 170

Query: 190  FFFPLDARDVLELR-DSWSSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVREEKTRQLT 248
              +PL  RD+ ++  D W  P+   + +   L+   E  +   P      +     + L 
Sbjct: 171  HCYPLP-RDIAQVVFDVWKGPKALLKDIDRYLQ--GEAPVIKAPPSQEETLASRHEQILA 227

Query: 249  ALKAPWPQWCGELRDLLNAAVAQKKADGRKLQARYFEAWLDKLQHWAASDETTLDIGTGW 308
             +     QWC  + +L +A +     D RK        W++K+  WA  +     +    
Sbjct: 228  RINQVKQQWCEAVSEL-DALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEAL 286

Query: 309  TRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRS---QLLRHACRWVSQRFR 365
             + + + L E  K    TPQHP   A++ L      L EP S    +L  A   + +   
Sbjct: 287  GKFSQRFLAERTKAGGVTPQHPLFVAIDNL------LGEPLSIKDLVLTRALSEIRETVA 340

Query: 366  HEQESRAQMGFQDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTL 425
             E+  R ++GF D+L+RLD ALR ++GE LA  IR +FPVAMIDEFQDTDP QYRIF  +
Sbjct: 341  QEKRRRGELGFDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRI 400

Query: 426  YRVADNDPQQGLILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGA 485
            +R   + P   L+LIGDPKQAIYAFRGADI+TY++AR +    HYTL TN+RS   MV +
Sbjct: 401  WR---HQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSA-HYTLDTNWRSAPGMVNS 456

Query: 486  VNQVFMQAENRADGAGAFLFRQPDGGNPVPFLPVQANGRDEA--WILEGAAAAALTCWTL 543
            VN++F Q  +      AF+FR       +PF PV+   R+++  + +  A   A+T W L
Sbjct: 457  VNKLFSQMND------AFMFRD------IPFSPVKFAPRNQSLQFKVNDAPQPAMTLW-L 503

Query: 544  ATDQPLSSAEYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGR 603
               +   S +Y+  MA  CA ++   L+ G  G A     G + RPVR  D++VLV + R
Sbjct: 504  MEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDA-LLTNGDSSRPVRASDISVLVRSRR 562

Query: 604  EAMAVRAQLSARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALATPLLG 663
            EA  +R  L+   + SVYLS+R+SVF++ +A E+   L A   PE +  LR+ALAT ++G
Sbjct: 563  EAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATSMMG 622

Query: 664  LSWQALDRLNHDEQEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFDVPRRLLA-ADNAR 722
            L+   ++ LN+DE  W+  V +F  Y+  W ++GV+PMLR LM   ++   LLA A   R
Sbjct: 623  LTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAGGER 682

Query: 723  ALTDVLHLSELLQQASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVH 782
             LTD+LH+SELLQ+A   L+ EHAL+R+LA+     +    + +LRLESD  LV++VT+H
Sbjct: 683  RLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIVTIH 742

Query: 783  KSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDDDG-QPRLELTASDEAVQRADHERLGED 841
            KSKGLEYPLV+LPF   FR  +Q      YHD    +  L+L+ ++E++  A+ ERL ED
Sbjct: 743  KSKGLEYPLVWLPFITHFRVQDQAF----YHDRHSYEAVLDLSHAEESIALAEAERLAED 798

Query: 842  LRKFYVALTRARYALWLGMAPL----------KELEKSAPGYLLGAGEPLEPAQLAQPLS 891
            LR  YVALTRA +   LG+APL           ++ +SA G LL  GEP++ A L   + 
Sbjct: 799  LRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDAAGLRACIE 858

Query: 892  AWCGAHSRMAPLPETDDEVYRAELNTPALGQEPPLPDMRRHRWRITSYSGLQLAPEGHYR 951
            A C           TD++ ++    + A      L  +    WR+TSYSGLQ    GH  
Sbjct: 859  ALCDEDIVCRTPGNTDNDRWQIAAASHAELSARALQRLLYDSWRVTSYSGLQ--QRGH-- 914

Query: 952  EFREPSAGDVP--EVQSAQQETFSEPQAFAEHLPPLPAGLDMYSFPRGAAPGSFLHGLLE 1009
                 +   +P  ++ +A     +E  A   H            FPRGA+PG+FLH L E
Sbjct: 915  ---SVAQDLIPRLDIDAAGVGEAAEAPAMTPH-----------HFPRGASPGTFLHSLFE 960

Query: 1010 WAGKEGFAALAAERHRVEDQVARRCNRQGW-TQWIPMLTDWLMALLSQPLALPTSPGSAV 1068
                     L   +      V  +    G+ T+W P+LT WL  +L  PL      G ++
Sbjct: 961  --------ELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPL---NETGVSL 1009

Query: 1069 SLAGLTQYQVEMEFWFALSQVDTQ-VLDQQVSA--ATLAGEPRAVLMREQLNGMLKGFID 1125
            S+    + QVEMEF+  ++Q  T   LD  +       AG P    M  Q+ GMLKGFID
Sbjct: 1010 SVLTEREKQVEMEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFM--QVRGMLKGFID 1067

Query: 1126 LVFEHQGRYYVLDYKSNWLGADAADYDPPRMARAMLDHRYDLQLALYLFALHRLLKSRLP 1185
            LVF ++GRYY+LDYKSNWLG D+A Y    MA AM  HRYDLQ  LY  ALHR L+ R+ 
Sbjct: 1068 LVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMT 1127

Query: 1186 DYDYDRHVGGALYLFLR--SSQAPGGGVFAQRPDWALMEALERLFSGETEATA 1236
            +YDY+RH GG +YLFLR    + P  G+F  RP  AL+  L+ +F+GE    A
Sbjct: 1128 NYDYERHFGGVIYLFLRGVDGERPQQGIFTTRPAAALINQLDDMFAGEMSEEA 1180