Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dianthicola ME23

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  417 bits (1073), Expect = e-121
 Identities = 275/642 (42%), Positives = 362/642 (56%), Gaps = 78/642 (12%)

Query: 42  PLLLLGAALVSYQLGRGHVCLDLAA-TLADSGFSLALPPEGDRSENRKIARPAAVLAGVT 100
           P + L AAL+S+  G GHVCL L+  TL +    L +               A +    T
Sbjct: 33  PAVTLAAALLSHDAGEGHVCLPLSRLTLTEEAHPLLV---------------ACISETAT 77

Query: 101 LSAWQAALQQPQLVSSGEGSTPLVLVGARLYLRRYWRYEQDVRHAITQQLKQNHVLRA-A 159
              W+  L     VS G+   PL+L G RLYL R W  E+ V          N V +A A
Sbjct: 78  PIDWKKRLLASAAVSCGDSPAPLILCGERLYLNRMWCNERTVARFF------NEVNQAIA 131

Query: 160 IAPAALRQRLDALFPGDAAGAANWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQ 219
           +    L + LDALFP       NWQK+A A+A     S+I+GGPGTGKTTTV KLLA L 
Sbjct: 132 VDEDQLSRILDALFP--PTDEVNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALI 189

Query: 220 SLALEQHGKPLRIRLAAPTGKAAARLNESIAGAIAGLTLDGLAQGEAIREHINSEVVTLH 279
            +A    G+  RIRLAAPTGKAAARL ES+  A+  L L      +A ++ I  +  TLH
Sbjct: 190 QMA---DGERCRIRLAAPTGKAAARLTESLGAALRQLPLT-----DAQKKRIPEDASTLH 241

Query: 280 RLLGSRPDTRHFRHHADNPLMLDVLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQL 339
           RLLG++P ++  RHHA NPL LDVLVVDEASM+DL MM+ L+ ++P   R+I LGD+DQL
Sbjct: 242 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDSLPPHGRVIFLGDRDQL 301

Query: 340 ASVEAGALMGELCRRAAQGHYLPQTRDWLRDVAGDAPDDALLDPHGSALDQSIAMLRHSY 399
           ASVEAGA++G++C     G    + R   R      P  A      ++L  S+ +L+ SY
Sbjct: 302 ASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGA--GTQAASLRDSLCLLQKSY 359

Query: 400 RFGADSGIGQLAEAVNDGDAAALAAVWQHGYADLARLTLTANDNRALREWVIDGAAGRFA 459
           RFG+DSGIG+LA A+N GD +A+ AV+Q G++D+ + TL ++D+ A    ++D A     
Sbjct: 360 RFGSDSGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQSSDDYA---GMLDEAL---- 412

Query: 460 SQPHAAAPVGYGDYLRRMVATQPDLTAPQSEFDHWAAQILDAFGQFQLLCALRNGPWGVD 519
                    GYG YLR +     +   P++        IL AF ++QLLCALR GP+GV 
Sbjct: 413 --------AGYGRYLRLL----HEKATPEA--------ILQAFNEYQLLCALREGPFGVR 452

Query: 520 SMNERIAHLLYRDGLLA--AWQGWYPGRPVMVTRNDYSQRLMNGDIGITLPVPLLQPDGS 577
            +N+RI   + +   +       WY GRPVM+ RND +  L NGDIGI L     +  G 
Sbjct: 453 GLNDRIEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALD----RGQGL 508

Query: 578 RAWVTRVAFPAGDGSSGIRWVLPGRLSAVETVFAMTVHKSQGSEFAHTALLLPDCLSPVL 637
           R W     F   DG+  I+ V P RL   +T +AMTVHKSQGSEF H AL+LP   SPV+
Sbjct: 509 RVW-----FVMPDGT--IKSVQPSRLPEHDTTWAMTVHKSQGSEFDHAALILPSQRSPVV 561

Query: 638 TRELVYTGITRAKHAFSLGCVGEHSTVLAEAVGRRVLRVSGL 679
           TRELVYT +TRA+   SL        +LA A+  R  R SGL
Sbjct: 562 TRELVYTAVTRARRRLSLYA---DERILAGAIVTRTERRSGL 600